; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020304 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020304
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr06:11688511..11689449
RNA-Seq ExpressionIVF0020304
SyntenyIVF0020304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036711.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]6.04e-4642.71Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHV------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHG
        MVNTRRGKYQ   T +G ED ++ TNMH VRMR    K      P  YRL     H+      L  D     LF   S            V L+ ++   
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHV------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHG

Query:  VFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKK
            N Q +  +                        K     NIDQGSN SHV+PE +P  E+PASE                            +P +K
Subjt:  VFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKK

Query:  SRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        S+K S RPKVITTKT  RKVP NI S+ +DGISFHLEESV +WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT  NVG FYP
Subjt:  SRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

KAA0056755.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]4.18e-8859.32Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDP-------------SNLSNMDSDERDDVPLIY
        MVNTRR KYQV  T IGSEDD+S TNMH+VR+R  +FKTTP  RPYRLPS++N V PSDPTK+ LF+DP             S+LS+MD ++RD+VPL +
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDP-------------SNLSNMDSDERDDVPLIY

Query:  ILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGN
        ILK GVFGKN Q DS VP  S+VV SPS  FVSLHFTSSSS +D                   N+DQ SN +HV+PE +P S+N A EH +EVQE ++ N
Subjt:  ILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGN

Query:  EASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK
        EASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK+PPN+ S+ IDGISFHL+ESV +
Subjt:  EASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK

KAA0066501.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]2.93e-4449.74Show/hide
Query:  VLPSDPTKEFLFTD-------------PSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSN
        V PS+PT+E LF D              SN+S++DS+ERDD+PLI+ILK GVF                                               
Subjt:  VLPSDPTKEFLFTD-------------PSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSN

Query:  LSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK
          HV+PE VPTS+N A EH TEVQEPNK +EA RDI DPVSDVG D PQKK+RKA   PKV+TTKTG RKVPPN+PS+ IDGISFHLEESVH+
Subjt:  LSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK

TYK27163.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]4.03e-16085.36Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQP
        MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH               SNLSNMDSDERDDVPLIYILK GVFGKNPQP
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQP

Query:  DSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRP
        DSSVPGTSTVVPSPS    +L          DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DPVSDVGEDRPQKKSRKASTRP
Subjt:  DSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRP

Query:  KVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        KVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQRR  DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Subjt:  KVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

XP_008460264.1 PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo]1.27e-4540.18Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERN----HVLP---------SDPTKEFLFTD---PSNLSNMDSDERDDVP
        MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++     VLP         S PT           +N+SNMDSD+RDDVP
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERN----HVLP---------SDPTKEFLFTD---PSNLSNMDSDERDDVP

Query:  LIYILKH---------------------------GVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV
        L  +LK                            GVF   P PD  +P TS V P PS        P  S      S  D  L NI  G+ + H     V
Subjt:  LIYILKH---------------------------GVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV

Query:  PTSENPASEHSTEVQEPNKG------NEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIV
                E   E Q P+ G      N+ +  ++ P S           +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI 
Subjt:  PTSENPASEHSTEVQEPNKG------NEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIV

Query:  DEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        DEVN+SDKH S +S+MDL  +AGL+KTI NVG FYP
Subjt:  DEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

TrEMBL top hitse value%identityAlignment
A0A1S3CDC6 uncharacterized protein LOC1034991431.1e-3938.79Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----------------LPSDPTKEFLFTDPSNLSNMDSDERDDVP
        MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++ +                +P+    +      +N+SNMDSD+RDDVP
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----------------LPSDPTKEFLFTDPSNLSNMDSDERDDVP

Query:  LIYILK---------------------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV
        L  +LK                            GVF   P PD  +P TS V P PS        P  S      S  D  L NI  G+ + H     V
Subjt:  LIYILK---------------------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV

Query:  PTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS
             P  +H     E    N+ +  ++ P S           +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI DEVN+S
Subjt:  PTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS

Query:  DKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        DKH S +S+MDL  +AGL+KTI NVG FYP
Subjt:  DKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

A0A5A7UT97 Cell wall protein RBR3-like1.8e-7159.32Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDP-------------SNLSNMDSDERDDVPLIY
        MVNTRR KYQV  T IGSEDD+S TNMH+VR+R  +FKTTP  RPYRLPS++N V PSDPTK+ LF+DP             S+LS+MD ++RD+VPL +
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDP-------------SNLSNMDSDERDDVPLIY

Query:  ILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGN
        ILK GVFGKN Q DS VP  S+VV SPS  FVSLHFTSSSS +D                   N+DQ SN +HV+PE +P S+N A EH +EVQE ++ N
Subjt:  ILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGN

Query:  EASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK
        EASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK+PPN+ S+ IDGISFHL+ESV +
Subjt:  EASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHK

A0A5D3BZR7 Cell wall protein RBR3-like1.8e-3942.41Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDE--------RDDVPLIYILK
        MVNTRRGKYQ   T +G ED ++ TNMH VRMR    K      P  YRL             KE  +  P  L ++  D+           V L+ ++ 
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDE--------RDDVPLIYILK

Query:  HGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ
              N Q +                 + L   +S        NIDQGSN SHV+PE +P  E+PASE                            +P 
Subjt:  HGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ

Query:  KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        +KS+K S RPKVITTKT  RKVP NI S+ +DGISFHLEESV +WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT  NVG FYP
Subjt:  KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

A0A5D3DR14 Uncharacterized protein1.1e-3938.79Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----------------LPSDPTKEFLFTDPSNLSNMDSDERDDVP
        MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++ +                +P+    +      +N+SNMDSD+RDDVP
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----------------LPSDPTKEFLFTDPSNLSNMDSDERDDVP

Query:  LIYILK---------------------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV
        L  +LK                            GVF   P PD  +P TS V P PS        P  S      S  D  L NI  G+ + H     V
Subjt:  LIYILK---------------------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELV

Query:  PTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS
             P  +H     E    N+ +  ++ P S           +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI DEVN+S
Subjt:  PTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS

Query:  DKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        DKH S +S+MDL  +AGL+KTI NVG FYP
Subjt:  DKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

A0A5D3DU39 Cell wall protein RBR3-like3.4e-12685.36Show/hide
Query:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQP
        MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH               SNLSNMDSDERDDVPLIYILK GVFGKNPQP
Subjt:  MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQP

Query:  DSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRP
        DSSVPGTSTVVPSPS    +L          DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DPVSDVGEDRPQKKSRKASTRP
Subjt:  DSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRP

Query:  KVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
        KVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQRR  DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Subjt:  KVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATT
CAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTA
ATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTT
GTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCC
AGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATG
TTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCC
ATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCT
AAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATT
CAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTA
ATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTT
GTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCC
AGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATG
TTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCC
ATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCT
AAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA
Protein sequenceShow/hide protein sequence
MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTV
VPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIP
IDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP