CuGenDBv2

Gene ID	IVF0020318
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Lipoxygenase
Genome location	chr05:23371804..23372157
RNA-Seq Expression	IVF0020318
Synteny	IVF0020318
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0031408 - oxylipin biosynthetic process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005515 - protein binding (molecular function) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR036392 - PLAT/LH2 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0047996.1 linoleate 9S-lipoxygenase 6 [Cucumis melo var. makuwa]

3.01e-43

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

KAA0047999.1 linoleate 9S-lipoxygenase 6 [Cucumis melo var. makuwa]

2.71e-43

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

TYK13821.1 linoleate 9S-lipoxygenase 6 [Cucumis melo var. makuwa]

2.71e-43

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

TYK13824.1 linoleate 9S-lipoxygenase 6 [Cucumis melo var. makuwa]

2.71e-43

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

XP_031737376.1 LOW QUALITY PROTEIN: linoleate 9S-lipoxygenase 6 [Cucumis sativus]

1.17e-41

96.47

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSV+NAGGNIV+KVSSIG KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFT8 Uncharacterized protein

1.2e-37

96.63

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQACNIS
        MFGIGKNIIEGALNTTGDLAGSV+NAGGNIV+KVSSIG KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQACNIS
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQACNIS

A0A5A7U185 Lipoxygenase

2.3e-36

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

A0A5A7U3H3 Lipoxygenase

2.3e-36

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

A0A5D3CPV1 Lipoxygenase

2.3e-36

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

A0A5D3CS06 Lipoxygenase

2.3e-36

100

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Query:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
Subjt:  MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

SwissProt top hits

e value

%identity

Alignment

P38415 Linoleate 9S-lipoxygenase A

1.2e-05

50.94

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Query:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        IGG    KK+KG V++M+ N LDFT L  S+ D   E LG  V+FQLIS+ Q+
Subjt:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)

1.2e-05

50.94

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Query:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        IGG    KK+KG V++M+ N LDFT L  S+ D   E LG  V+FQLIS+ Q+
Subjt:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

Q43189 Probable linoleate 9S-lipoxygenase 3

1.6e-05

53.33

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Query:  KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQ
        KK+KG V++M  NVLDFT L SS+     ++LG  V+FQLIS+ Q
Subjt:  KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQ

Q43190 Probable linoleate 9S-lipoxygenase 4

1.2e-05

50.94

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Query:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        IGG    KK+KG V++M+ N LDFT L  S+ D   E LG  V+FQLIS+ Q+
Subjt:  IGG----KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

Q43191 Probable linoleate 9S-lipoxygenase 5

4.1e-06

47.46

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Query:  IVEKV---SSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA
        IVE +   S   GKK+KG ++LM+ NVLDF  +++S+LD   E LG  V+ QLIS   A
Subjt:  IVEKV---SSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQA

Arabidopsis top hits

e value

%identity

Alignment

AT1G55020.1 lipoxygenase 1

7.2e-06

48.84

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Query:  KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISA
        KK+KG V+LM+ NVLDF   ++S LD   E LG+ +T +L+S+
Subjt:  KKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISA

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein

1.3e-04

41.51

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Query:  EKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQ
        E V      KI+G+V++M+ N+LDF  + +S+LD   E+LG  V+  LIS+ Q
Subjt:  EKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQ

Sequences

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CDS sequence

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ATGTTTGGAATTGGGAAGAACATCATTGAAGGAGCCTTGAATACTACTGGAGATCTTGCAGGCTCTGTTATCAATGCTGGTGGTAACATTGTTGAGAAAGTTTCAAGTAT
TGGAGGAAAAAAAATAAAAGGGAAAGTGATTCTTATGAGAAGTAATGTTTTGGATTTCACTCAATTACATTCCTCTGTTCTTGATACCTTCACTGAGATCTTGGGTAGTG
GTGTTACCTTTCAACTCATCAGTGCCACTCAAGCCTGTAACATCTCTTTCCTCTCTAATCTAAATTTACAGTTAAATTACAAGTTTAGCATCTCTATTTTGTGTCTTTCT
ACTATTTTTATAAAAGATACCTAG

mRNA sequence

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Protein sequence

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MFGIGKNIIEGALNTTGDLAGSVINAGGNIVEKVSSIGGKKIKGKVILMRSNVLDFTQLHSSVLDTFTEILGSGVTFQLISATQACNISFLSNLNLQLNYKFSISILCLS
TIFIKDT

IVF0020318 (gene) of Melon (IVF77) v1 genome