; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020325 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020325
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpentatricopeptide repeat-containing protein At2g15690
Genome locationchr01:320310..321153
RNA-Seq ExpressionIVF0020325
SyntenyIVF0020325
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031291.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.14e-12399.49Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQ+
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT

KAE8645866.1 hypothetical protein Csa_017177 [Cucumis sativus]1.82e-10189.34Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSSF KVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWNPPNQS  QYQNPSQP PPNQS+PQYQ PSQP PPNQSYPQYQNPSQ NPPNQ+
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT

XP_008454941.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690 [Cucumis melo]5.05e-12298.97Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPN
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQ PSQP+PPNQSYPQYQNPSQPNPPN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPN

XP_022952757.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata]4.31e-7472.4Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  N+TETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q QWGSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN
        DY QQG+PSNQ+NYRSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q S  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN

XP_031744652.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sativus]9.23e-10089.34Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSSF KVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWNPPNQS  QYQNPSQP PPNQS+PQYQ PSQP PPNQSYPQYQNPSQ NPPNQ+
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT

TrEMBL top hitse value%identityAlignment
A0A0A0K6L3 DYW_deaminase domain-containing protein3.7e-8289.8Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSS FKVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQ
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWNPPNQS  QYQNPSQP PPNQS+PQYQ PSQP PPNQSYPQYQNPSQPN PNQ
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQ

A0A1S3BZP9 pentatricopeptide repeat-containing protein At2g156907.4e-9998.97Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPN
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQ PSQP+PPNQSYPQYQNPSQPNPPN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPN

A0A5D3C491 Pentatricopeptide repeat-containing protein2.3e-10099.49Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQ+
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQT

A0A6J1GL94 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like1.6e-6172.4Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  N+TETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q QWGSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN
        DY QQG+PSNQ+NYRSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q S  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN

A0A6J1I4R8 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like2.2e-5871.35Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  NQTETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q Q GSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN
        DY Q G+PSNQ+N RSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q S  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTAATGGCTGTCCGGCGTGTTCGAACCCCCATTACTGTCTCCTCCTTCTTCAAGGTACGGTATCCTCTCTCTTCTTCTTTCACTTTCACTTTTCGAAACCA
GACGGAGACACTAATCAAAACCCTAAGCACCTCGGCAATTCCTAGCGATTTCTCTAACTTTCCTTCTTCGCCGCAACAACCTTCTTCGTCTAGCCCTCCATATCGTCAGC
CGCAGTGGGGCTCGCCGAGCCAGGTTAATCCTCCAAGTGAAAATTTTAATCGCCAGTCGTTCTCGGAGTTTCAGAATCACGATTATGCTCAACAGGGAACTCCTAGTAAT
CAATTGAATTATCGGAGTCAGCATCAGAGTCCTCAACCCAATCCTGGATTTTCCCGGGAGGGTCAGAGCTATACTCAAGTCGGCAAAACTAATTCGTGGAACCCTCCAAA
TCAAAGTTACCCTCAATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAAGCTACCCTCAATATCAAAAGCCTTCGCAGCCGAGCCCTCCAAACCAAAGCTACCCTC
AATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAACTACCCTCAATATCAAAATCCTTCGCAGCCAAACCCTCCAAATCAAAGCTACCCTCAATATCAAAATCCTT
CGCAGCCGAACCCTCCAAATTTCAATTATCAGCAACAAAGAGGCCCTAACCAATGGAACAATCAAAATCAAGGACACCCACAATTTGGAAGGTCGGAACATCGTAACCCA
CAACCAGAAAATTCTAATCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTAATGGCTGTCCGGCGTGTTCGAACCCCCATTACTGTCTCCTCCTTCTTCAAGGTACGGTATCCTCTCTCTTCTTCTTTCACTTTCACTTTTCGAAACCA
GACGGAGACACTAATCAAAACCCTAAGCACCTCGGCAATTCCTAGCGATTTCTCTAACTTTCCTTCTTCGCCGCAACAACCTTCTTCGTCTAGCCCTCCATATCGTCAGC
CGCAGTGGGGCTCGCCGAGCCAGGTTAATCCTCCAAGTGAAAATTTTAATCGCCAGTCGTTCTCGGAGTTTCAGAATCACGATTATGCTCAACAGGGAACTCCTAGTAAT
CAATTGAATTATCGGAGTCAGCATCAGAGTCCTCAACCCAATCCTGGATTTTCCCGGGAGGGTCAGAGCTATACTCAAGTCGGCAAAACTAATTCGTGGAACCCTCCAAA
TCAAAGTTACCCTCAATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAAGCTACCCTCAATATCAAAAGCCTTCGCAGCCGAGCCCTCCAAACCAAAGCTACCCTC
AATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAACTACCCTCAATATCAAAATCCTTCGCAGCCAAACCCTCCAAATCAAAGCTACCCTCAATATCAAAATCCTT
CGCAGCCGAACCCTCCAAATTTCAATTATCAGCAACAAAGAGGCCCTAACCAATGGAACAATCAAAATCAAGGACACCCACAATTTGGAAGGTCGGAACATCGTAACCCA
CAACCAGAAAATTCTAATCAGTTGA
Protein sequenceShow/hide protein sequence
MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNHDYAQQGTPSN
QLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQKPSQPSPPNQSYPQYQNPSQPNPPNQTTLNIKILRSQTLQIKATLNIKIL
RSRTLQISIISNKEALTNGTIKIKDTHNLEGRNIVTHNQKILIS