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IVF0020342 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020342
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLysine-specific demethylase JMJ25
Genome locationchr10:17177104..17177433
RNA-Seq ExpressionIVF0020342
SyntenyIVF0020342
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0033169 - histone H3-K9 demethylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
GO:0032454 - histone demethylase activity (H3-K9 specific) (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065989.1 lysine-specific demethylase JMJ25 [Cucumis melo var. makuwa]2.67e-71100Show/hide
Query:  MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN
        MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN
Subjt:  MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN

Query:  RIISKDDSS
        RIISKDDSS
Subjt:  RIISKDDSS

KAA0066188.1 lysine-specific demethylase JMJ25 [Cucumis melo var. makuwa]4.94e-4286.02Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S SKD ETLQ NEGE+NG+EEKGFVGGENGEL+C+ SIQS  RSLRKK RVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

XP_008463115.1 PREDICTED: lysine-specific demethylase JMJ25 [Cucumis melo]4.97e-4286.02Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S SKD ETLQ NEGE+NG+EEKGFVGGENGEL+C+ SIQS  RSLRKK RVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

XP_011655121.1 lysine-specific demethylase JMJ25 [Cucumis sativus]5.97e-4182.8Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S S+D ETLQ NEGE+NG+EEKGFVGGENGEL+C+VSIQS  RSLRKK +VSYN++VYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

XP_022938431.1 lysine-specific demethylase JMJ25-like [Cucurbita moschata]5.60e-2669.32Show/hide
Query:  KDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDE-DDVVEIPFKKPGRRGRKKKEFSSNRIIS
        +D +TL+  EGE+NG+EEKGF GGE+G L+C VSI S  RSLRKK RVSYN+EVYEFDE DD  +IPFK  GRRGRKKK FSSNR +S
Subjt:  KDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDE-DDVVEIPFKKPGRRGRKKKEFSSNRIIS

TrEMBL top hitse value%identityAlignment
A0A0A0KSZ6 Uncharacterized protein9.0e-3582.8Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S S+D ETLQ NEGE+NG+EEKGFVGGENGEL+C+VSIQS  RSLRKK +VSYN++VYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

A0A1S3CII1 lysine-specific demethylase JMJ251.1e-3586.02Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S SKD ETLQ NEGE+NG+EEKGFVGGENGEL+C+ SIQS  RSLRKK RVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

A0A5A7VEQ0 Lysine-specific demethylase JMJ251.1e-3586.02Show/hide
Query:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD
        S SKD ETLQ NEGE+NG+EEKGFVGGENGEL+C+ SIQS  RSLRKK RVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRI+S+DD
Subjt:  STSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDD

A0A5A7VKZ5 Lysine-specific demethylase JMJ251.1e-53100Show/hide
Query:  MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN
        MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN
Subjt:  MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSN

Query:  RIISKDDSS
        RIISKDDSS
Subjt:  RIISKDDSS

A0A6J1FD51 lysine-specific demethylase JMJ25-like8.8e-2268.48Show/hide
Query:  KDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDE-DDVVEIPFKKPGRRGRKKKEFSSNRIIS-KDD
        +D +TL+  EGE+NG+EEKGF GGE+G L+C VSI S  RSLRKK RVSYN+EVYEFDE DD  +IPFK  GRRGRKKK FSSNR +S K+D
Subjt:  KDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDE-DDVVEIPFKKPGRRGRKKKEFSSNRIIS-KDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGACCAAGATGGCAGAAGGGGATGGAGGGTTGGTTTTTCAACTAGTAAAGATAGGGAAACCCTGCAATGGAATGAAGGTGAGAACAATGGTAAAGAAGAGAAGGG
CTTTGTTGGTGGGGAAAATGGGGAACTGAAATGTAAGGTTTCTATTCAAAGTTCACCGAGGAGTTTAAGAAAGAAGGTGAGAGTTTCGTACAACGAGGAGGTTTATGAGT
TTGATGAGGATGATGTAGTGGAGATTCCTTTCAAGAAGCCTGGGCGGAGGGGTAGGAAGAAGAAGGAATTTTCTTCGAATCGGATTATATCAAAGGATGATTCCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGACCAAGATGGCAGAAGGGGATGGAGGGTTGGTTTTTCAACTAGTAAAGATAGGGAAACCCTGCAATGGAATGAAGGTGAGAACAATGGTAAAGAAGAGAAGGG
CTTTGTTGGTGGGGAAAATGGGGAACTGAAATGTAAGGTTTCTATTCAAAGTTCACCGAGGAGTTTAAGAAAGAAGGTGAGAGTTTCGTACAACGAGGAGGTTTATGAGT
TTGATGAGGATGATGTAGTGGAGATTCCTTTCAAGAAGCCTGGGCGGAGGGGTAGGAAGAAGAAGGAATTTTCTTCGAATCGGATTATATCAAAGGATGATTCCAGTTGA
Protein sequenceShow/hide protein sequence
MGDQDGRRGWRVGFSTSKDRETLQWNEGENNGKEEKGFVGGENGELKCKVSIQSSPRSLRKKVRVSYNEEVYEFDEDDVVEIPFKKPGRRGRKKKEFSSNRIISKDDSS