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IVF0020357 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020357
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr05:14795709..14795927
RNA-Seq ExpressionIVF0020357
SyntenyIVF0020357
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050355.1 protein Ycf2-like [Cucumis melo var. makuwa]9.93e-2481.16Show/hide
Query:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
        MCGYEDG+R KR DDG VRRVKK KRRRRR  WRWLREGSRGRAD GGDTNGGERMETAA   VGR R+
Subjt:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
KAA0056205.1 uncharacterized protein E6C27_scaffold431G00330 [Cucumis melo var. makuwa]5.24e-2582.61Show/hide
Query:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
        MCGY+DGRRRKR DDGCVRRVKKLKRRRRR  WRWLREG RGRAD GGDTN GERMETAA   VGR R+
Subjt:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
TrEMBL top hitse value%identityAlignment
A0A5A7U9S5 Protein Ycf2-like6.0e-1981.16Show/hide
Query:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
        MCGYEDG+R KR DDG VRRVKK KRRRRR  WRWLREGSRGRAD GGDTNGGERMETAA   VGR R+
Subjt:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
A0A5A7URF1 RNase H domain-containing protein4.2e-2082.61Show/hide
Query:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
        MCGY+DGRRRKR DDGCVRRVKKLKRRRRR  WRWLREG RGRAD GGDTN GERMETAA   VGR R+
Subjt:  MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGTTACGAAGACGGCAGACGGCGCAAACGCACGGATGATGGCTGCGTTCGTCGGGTGAAGAAGCTGAAAAGAAGAAGAAGAAGAATGGTGTGGCGTTGGCTTCG
TGAAGGCAGTCGAGGACGCGCGGACAGAGGTGGAGACACGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGTTACGAAGACGGCAGACGGCGCAAACGCACGGATGATGGCTGCGTTCGTCGGGTGAAGAAGCTGAAAAGAAGAAGAAGAAGAATGGTGTGGCGTTGGCTTCG
TGAAGGCAGTCGAGGACGCGCGGACAGAGGTGGAGACACGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGGCTGA
Protein sequenceShow/hide protein sequence
MCGYEDGRRRKRTDDGCVRRVKKLKRRRRRMVWRWLREGSRGRADRGGDTNGGERMETAASDDVGRRRRWNG