| GenBank top hits | e value | %identity | Alignment |
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| KAA0061435.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.18e-106 | 94.22 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPIAFFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHS+ELKA+ST GI+DMEVVTKEVEKDEELQL+ QQLQ NPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| TYJ96663.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.98e-104 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.98e-104 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| TYK21513.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.18e-106 | 94.22 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPIAFFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHS+ELKA+ST GI+DMEVVTKEVEKDEELQL+ QQLQ NPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| TYK27058.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.98e-104 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3BBH7 Ty3/gypsy retrotransposon protein | 4.4e-88 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| A0A5D3DU86 Ty3/gypsy retrotransposon protein | 4.4e-88 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| A0A5D3DWA9 Ty3/gypsy retrotransposon protein | 4.4e-88 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| A0A5D3DZK6 Ty3/gypsy retrotransposon protein | 4.4e-88 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| A0A5D3E325 Ty3/gypsy retrotransposon protein | 4.4e-88 | 100 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.1e-22 | 41.98 | Show/hide |
Query: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
+S P+L +PD++ F + TDAS LGAVLSQ+ HP+++ S+ L+ S E+EL+A+V + + +RHYLLGR F I SD + L +L ++ +
Subjt: MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRM
+W KL +DF+I Y G +N ADALSR+
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRM
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.8e-17 | 37.5 | Show/hide |
Query: VLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLG-RRFTIMSDQKALKFLLEQREVQPQFQKWL
+L PD+ PF + TDAS SG+GAVLSQ PI S+ L Q + EREL+A+V ++ K +++L G R I +D + L F + R + ++W
Subjt: VLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLG-RRFTIMSDQKALKFLLEQREVQPQFQKWL
Query: TKLLGYDFEILYQPGLQNKAADALSRMD
+ + ++ ++ Y+PG +N ADALSR +
Subjt: TKLLGYDFEILYQPGLQNKAADALSRMD
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.5e-24 | 45.67 | Show/hide |
Query: PVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWL
P+L LPD+ F++ TDAS LGAVLSQN HPI+F S+ L+ S E+EL+A+V + + +RHYLLGR+F I SD + L++L +E + ++W
Subjt: PVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWL
Query: TKLLGYDFEILYQPGLQNKAADALSRM
+L Y F+I Y G +N ADALSR+
Subjt: TKLLGYDFEILYQPGLQNKAADALSRM
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 9.6e-16 | 35.21 | Show/hide |
Query: VLALPDWSLPFMIETDASGSGLGAVLSQN----SHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGR-RFTIMSDQKALKFLLEQREVQPQF
+LA P ++ PF + TDAS +GAVLSQ+ PIA+ S+ L+ + + E+E++A++ S+ R YL G + +D + L F L R +
Subjt: VLALPDWSLPFMIETDASGSGLGAVLSQN----SHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGR-RFTIMSDQKALKFLLEQREVQPQF
Query: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST
++W ++ Y+ E++Y+PG N ADALSR+ +L LST
Subjt: QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.8e-14 | 32.97 | Show/hide |
Query: PVLALPDWSLPFMIETDASGSGLGAVLSQNS-----HPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLG--RRFTIMSDQKAL--KFLLEQRE
PVL D+S ++ETDAS +GAVLSQ +P+ ++S K+S S+ ++E++A++ S++ WRHYL F I++D + L + E
Subjt: PVLALPDWSLPFMIETDASGSGLGAVLSQNS-----HPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLG--RRFTIMSDQKAL--KFLLEQRE
Query: VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKALSTTGIVDMEVVTKEVEKDEELQLL
+ +W L ++FEI Y+PG N ADALSR+ D+SI + +S T +VVT+ + L LL
Subjt: VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKALSTTGIVDMEVVTKEVEKDEELQLL
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