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IVF0020362 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020362
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:19847763..19847930
RNA-Seq ExpressionIVF0020362
SyntenyIVF0020362
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]1.04e-2889.09Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDD+D VDEGDS YATTTASEDI YIETTNEWSQWRDELAESMFT+WQL NA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]2.52e-2787.27Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDD+D  DEGDS YATTTASEDIQYIETTNEWSQWRD+LAESMFT WQL NA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

TYK03086.1 retrotransposon protein [Cucumis melo var. makuwa]1.53e-2896.36Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQL N 
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]7.04e-2785.45Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCD+VD  DEGDS YATTTASEDIQYIETTNEWSQWRD+LAESMFT WQL N 
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]1.00e-2687.27Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDDVD  DE DS YATTTASEDIQYIETTNEWSQWRDEL ESMFT+WQL NA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

TrEMBL top hitse value%identityAlignment
A0A5A7TAL2 Retrotransposon protein4.6e-1985.45Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDDV+  DEGDS YATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ CNA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

A0A5A7UCL2 Retrotransposon protein4.6e-1985.45Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDDV+  DEGDS YATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ CNA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

A0A5A7V4Q8 Retrotransposon protein4.6e-1987.27Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDD+D  DEGDS YATTTASEDIQYIETTNEWSQWRD+LAESMFT WQL NA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

A0A5D3BDZ0 Retrotransposon protein1.2e-1989.09Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA
        MTYCDD+D VDEGDS YATTTASEDI YIETTNEWSQWRDELAESMFT+WQL NA
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA

A0A5D3BY22 Retrotransposon protein2.6e-2298.15Show/hide
Query:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCN
        MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQL N
Subjt:  MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGATGTTGACTACGTGGACGAGGGAGACTCCAGGTACGCGACGACCACCGCTTCAGAAGACATTCAGTATATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGCCGAATCGATGTTCACTAATTGGCAGTTGTGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGATGTTGACTACGTGGACGAGGGAGACTCCAGGTACGCGACGACCACCGCTTCAGAAGACATTCAGTATATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGCCGAATCGATGTTCACTAATTGGCAGTTGTGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDYVDEGDSRYATTTASEDIQYIETTNEWSQWRDELAESMFTNWQLCNA