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IVF0020372 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020372
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:9788961..9789146
RNA-Seq ExpressionIVF0020372
SyntenyIVF0020372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026116.1 retrotransposon protein [Cucumis melo var. makuwa]1.17e-2677.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

KAA0036555.1 retrotransposon protein [Cucumis melo var. makuwa]1.14e-2675.41Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ +ECLVELVN  GWRSDNGTFRP Y +QLARMM  K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]2.11e-2577.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

TYJ99726.1 retrotransposon protein [Cucumis melo var. makuwa]1.55e-2677.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

TYK24214.1 retrotransposon protein [Cucumis melo var. makuwa]1.25e-35100Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
        MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP

TrEMBL top hitse value%identityAlignment
A0A5A7TUJ7 Retrotransposon protein3.0e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5A7U098 Retrotransposon protein1.3e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3BKP9 Retrotransposon protein3.0e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3C1M0 Retrotransposon protein1.3e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3DKT3 Retrotransposon protein4.3e-26100Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
        MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCATCAAGGGCCCCTAACCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTGGCGATCCGACAA
TGGAACCTTTAGACCTGAGTACCATAGTCAGCTTGCAAGAATGATGGCTCAGAAGATGCCAGGTTGTAACATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCATCAAGGGCCCCTAACCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTGGCGATCCGACAA
TGGAACCTTTAGACCTGAGTACCATAGTCAGCTTGCAAGAATGATGGCTCAGAAGATGCCAGGTTGTAACATATAG
Protein sequenceShow/hide protein sequence
MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI