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IVF0020403 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020403
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATBET12
Genome locationchr05:5036294..5036992
RNA-Seq ExpressionIVF0020403
SyntenyIVF0020403
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.38e-4975.78Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHHHH HH     KE E EK 
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV

XP_004142258.1 uncharacterized protein At4g14450, chloroplastic [Cucumis sativus]6.93e-5175.97Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS-PKDIQNW-TPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE
        MADSH  TSP  T     PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS PKDI +W TPDSR+ SS +SSSS      HHHH  H H HHKE + E
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSS-PKDIQNW-TPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE

Query:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV
        KAPVFKKWQHPAAPFHYDSG RAPRFVPV
Subjt:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV

XP_008460625.2 PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo]1.81e-82100Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]1.72e-4875Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MA+S RR S    R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHHHH      HHKE E EK 
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]1.39e-6080.31Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MADSHRRTS  + RHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASS+SS                QH HHKE E EK 
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ8 Uncharacterized protein2.0e-3875.97Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNW-TPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE
        MADSH  TSP  T     PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP SSPKDI +W TPDSR+ SS +SSSS      HHHH  H H HHKE + E
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNW-TPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE

Query:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV
        KAPVFKKWQHPAAPFHYDSG RAPRFVPV
Subjt:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV

A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like9.1e-63100Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

A0A6J1CA35 uncharacterized protein At4g14450, chloroplastic-like1.0e-2963.78Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MAD+ RRTS   +R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN    SRE S++S  S                    +PE    
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PV KKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like1.2e-3574.22Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHH        HHKE E EK 
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like1.1e-3675Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA
        MA+S RR S    R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHHHH      HHKE E EK 
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKA

Query:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPR-FVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic1.3e-0536.43Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE
        MA + +RTS +   + +Q S+LQRRAP+ +    + S+W VAIPLLSPL                      + S +SS    H     ++ +   E E +
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE

Query:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV
        K PVFKKWQHPA+PF Y+     P F+ V
Subjt:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein8.9e-1040.57Show/hide
Query:  QQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVS-PSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPF
        ++ SRLQRRAP  L+IN   ++WKVAIPLLSP  S P  P  +                               + +     EAEK PVFKKWQHPAAPF
Subjt:  QQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVS-PSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPF

Query:  HYDSGP
        +Y   P
Subjt:  HYDSGP

AT3G23170.1 unknown protein6.8e-1041.03Show/hide
Query:  QQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSP-SSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPA
        +QPSRL +R PA   +      ++W  AIPLLSPL +SP SSP D     P  +  S+A +                          EK PVFKKWQHPA
Subjt:  QQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSP-SSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPA

Query:  APFHYDSGPRAPRFVPV
        APF+Y+S    P FVPV
Subjt:  APFHYDSGPRAPRFVPV

AT4G14450.1 unknown protein9.2e-0736.43Show/hide
Query:  MADSHRRTSPTTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE
        MA + +RTS +   + +Q S+LQRRAP+ +    + S+W VAIPLLSPL                      + S +SS    H     ++ +   E E +
Subjt:  MADSHRRTSPTTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAE

Query:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV
        K PVFKKWQHPA+PF Y+     P F+ V
Subjt:  KAPVFKKWQHPAAPFHYDSGPRAPRFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCCCACCGACGAACCTCCCCCACCACTACCCGCCATCCCCAGCAACCAAGCCGTCTTCAACGCCGCGCTCCGGCCTCCCTCCAAATCAATCGCTCCGATTG
GAAGGTCGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGATATCCAGAATTGGACGCCCGATTCCAGAGAAGCTTCCTCCGCTTCTTCTTCTTCTT
CTTCTTCTTCCCATCATCATCATCATCATCATCAACATCATCAACATCAACATCATAAAGAACCAGAGGCGGAGAAGGCGCCGGTATTCAAGAAATGGCAGCATCCGGCG
GCTCCATTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
TGTCTCCCCTATAATAACCCCTTTTTCTCTTCCTCATCCTTCTTATCTTCTTCCCCCCTTCCCCCAAATTCCTACTTTTCCCCTTTCTCTTCTTTATCTTATGGCCGACT
CCCACCGACGAACCTCCCCCACCACTACCCGCCATCCCCAGCAACCAAGCCGTCTTCAACGCCGCGCTCCGGCCTCCCTCCAAATCAATCGCTCCGATTGGAAGGTCGCC
ATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGATATCCAGAATTGGACGCCCGATTCCAGAGAAGCTTCCTCCGCTTCTTCTTCTTCTTCTTCTTCTTC
CCATCATCATCATCATCATCATCAACATCATCAACATCAACATCATAAAGAACCAGAGGCGGAGAAGGCGCCGGTATTCAAGAAATGGCAGCATCCGGCGGCTCCATTTC
ATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAGATTTTTTTTTTGAATTAAAAGAAATAAAATATGTTGAATTAGATCTGTAATGATAAGAATTTGTAG
TCCGTAGATCTAACGGTCTGTTTTTGAGGAGCTTATTGACTGCAACTTATGGTTAACCACAGTTGAATATTTTTGTACATTGTGTTTTATTAGTATTTTTATTATTAATT
GGTCACATCACTCATTAGTCATTACACTCCTTAACGTTA
Protein sequenceShow/hide protein sequence
MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPA
APFHYDSGPRAPRFVPV