; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020415 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020415
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:3300271..3301473
RNA-Seq ExpressionIVF0020415
SyntenyIVF0020415
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]2.81e-23087.92Show/hide
Query:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI
        MAPDRLDLQ++EKKS ESFKEYA+RWRDM AEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAEAT EYGGIKKGTI
Subjt:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI

Query:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN
        SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISN SHIPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQN
Subjt:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN

Query:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM
        RQLA IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKR VQSLIN GWLSFKKSGEK NV ENPLP+HENPKV VVDSLVEKC+NEVHEIVMPM
Subjt:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM

Query:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK
        EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFH+GVAG+VVQQCQK RSKVQQLMDSK LTVYRGQGKDEMK SKIC  MDEVSEK
Subjt:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK

KAA0036950.1 uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]7.08e-23188.05Show/hide
Query:  DRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKK
        +RLDLQ+MEKKS ESFKEYA+RWRDMAAEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAEAT EYGGIKKGTISKK
Subjt:  DRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKK

Query:  KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQL
        KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISN SHIPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQNRQL
Subjt:  KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQL

Query:  APIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEAL
        A IPMIPIQPPYPKWYDSNAR DYHAGGVGHSTENCLALKR VQSLIN  WLSFKKSGEK NVNENPLP+HENPKV VVDSLVEKCKNEVHEIVMPMEAL
Subjt:  APIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEAL

Query:  FEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSE
        FEGLFEAGYV HEYLDPNIRYEGYDESRHCIFH+GVAG+VVQQCQK RSKVQQLMDSK LTVYRGQGKDEMKDSKIC  MDEVSE
Subjt:  FEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSE

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]4.56e-23487.66Show/hide
Query:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI
        MAP+RLDLQ+MEKKS ESFKEYA+RW+DM AEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAE T EYGGIKKGTI
Subjt:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI

Query:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN
        SKKKEGE+HAIGFPNSGKHKSIFGQRKYEQNFPSYISN S+IPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQN
Subjt:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN

Query:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM
        RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENC ALKR VQSLIN GWLSFKKSGEKPNVNENPLPNHENPKV  VDSLVEKCKNEVHEIVMPM
Subjt:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM

Query:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK
        EALFE LFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAG+VVQQCQK RSKVQQLMDSK LTVYRGQ KDEMKDSK+CA MDEVSEK
Subjt:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK

KAA0066096.1 uncharacterized protein E6C27_scaffold21G00870 [Cucumis melo var. makuwa]2.24e-21487.53Show/hide
Query:  MAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKY
        MAAEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIV+GERIEYGIKHGRLAE T EYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIF QRKY
Subjt:  MAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKY

Query:  EQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYH
        EQNFPS+ISN SHIPYNSYVPA+ +SETPKPVNSNSPRPFVQGQ                   ELLPQLIQNRQLA IPMIPIQP YPKWYDSNARCDYH
Subjt:  EQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYH

Query:  AGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYD
        AGGVGHSTEN LALKRKVQSLIN GWLSFKKSGEKPNVNENPLP+HENPKV VVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYD
Subjt:  AGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYD

Query:  ESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK
        ESRHCIFHQGVAG+VVQQCQK RSKVQQLMDSK LTVYRGQ KDEMKDSK+CA MDEV EK
Subjt:  ESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEK

KAA0066746.1 uncharacterized protein E6C27_scaffold271G00850 [Cucumis melo var. makuwa]4.58e-22594.49Show/hide
Query:  MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA
        MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA
Subjt:  MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA

Query:  IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYHA
        IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ            APIPMIPIQPPYPKWYDSNARCDYHA
Subjt:  IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYHA

Query:  GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE
        GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE
Subjt:  GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE

Query:  SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEM
        SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTV  G   D +
Subjt:  SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEM

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein4.4e-19387.69Show/hide
Query:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI
        MAPDRLDLQ++EKKS ESFKEYA+RWRDM AEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAEAT EYGGIKKGTI
Subjt:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI

Query:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN
        SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISN SHIPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQN
Subjt:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN

Query:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM
        RQLA IPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKR VQSLIN GWLSFKKSGEK NV ENPLP+HENPKV VVDSLVEKC+NEVHEIVMPM
Subjt:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM

Query:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE
        EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFH+GVAG+VVQQCQK RSKVQQLMDSK LTVYRGQGKDEMK SKIC  MDEVSEK+
Subjt:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE

A0A5A7T0R1 Uncharacterized protein1.2e-19087.6Show/hide
Query:  DRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKK
        +RLDLQ+MEKKS ESFKEYA+RWRDMAAEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAEAT EYGGIKKGTISKK
Subjt:  DRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKK

Query:  KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQL
        KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISN SHIPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQNRQL
Subjt:  KEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQNRQL

Query:  APIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEAL
        A IPMIPIQPPYPKWYDSNAR DYHAGGVGHSTENCLALKR VQSLIN  WLSFKKSGEK NVNENPLP+HENPKV VVDSLVEKCKNEVHEIVMPMEAL
Subjt:  APIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEAL

Query:  FEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE
        FEGLFEAGYV HEYLDPNIRYEGYDESRHCIFH+GVAG+VVQQCQK RSKVQQLMDSK LTVYRGQGKDEMKDSKIC  MDEVSE +
Subjt:  FEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.8e-17886.41Show/hide
Query:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI
        MAPD LDLQ+MEKKS ESFKEYA+RWRDMAAEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAEAT EYG IKKGTI
Subjt:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI

Query:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN
        SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISN SHIPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   E+LPQLIQN
Subjt:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN

Query:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM
        RQLA IPMIPIQPPY KWYDSNARCDYHAGGVGHS ENCLALKR VQSLINVGWLSFKKSGEK NV ENPLP+HENPKV  VDS VEKCKNE+HEIVMPM
Subjt:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM

Query:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRG
        EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFH+GVAG+VVQQCQK RSKVQQLMDSK LTV  G
Subjt:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRG

A0A5A7V3W7 Retrotrans_gag domain-containing protein5.1e-19487.44Show/hide
Query:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI
        MAP+RLDLQ+MEKKS ESFKEYA+RW+DM AEVQP LTDKEMTSMFMNTLR P YERMIGNAST FSDIIVIGERIEYGIKHGRLAE T EYGGIKKGTI
Subjt:  MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTI

Query:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN
        SKKKEGE+HAIGFPNSGKHKSIFGQRKYEQNFPSYISN S+IPYNSYVPA+ VSETPKPVNSNSPRPFVQGQ                   ELLPQLIQN
Subjt:  SKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ-------------------ELLPQLIQN

Query:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM
        RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENC ALKR VQSLIN GWLSFKKSGEKPNVNENPLPNHENPKV  VDSLVEKCKNEVHEIVMPM
Subjt:  RQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPM

Query:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE
        EALFE LFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAG+VVQQCQK RSKVQQLMDSK LTVYRGQ KDEMKDSK+CA MDEVSEK+
Subjt:  EALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKE

A0A5A7VK41 Reverse transcriptase domain-containing protein2.0e-18594.49Show/hide
Query:  MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA
        MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA
Subjt:  MEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA

Query:  IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYHA
        IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQ            APIPMIPIQPPYPKWYDSNARCDYHA
Subjt:  IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYHA

Query:  GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE
        GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE
Subjt:  GGVGHSTENCLALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDE

Query:  SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEM
        SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTV  G   D +
Subjt:  SRHCIFHQGVAGYVVQQCQKVRSKVQQLMDSKTLTVYRGQGKDEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAGACCGTTTAGACTTGCAACAAATGGAGAAGAAGAGTTTGGAAAGCTTCAAAGAATATGCTCGACGATGGAGAGATATGGCTGCCGAGGTTCAACCACTGTT
AACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGACTCCATTATATGAGCGAATGATTGGTAATGCATCAACAAAATTTTCTGATATTATTGTTATTGGCG
AAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAATTGAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAGGAGAGGTTCATGCA
ATTGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGGCTCTCATATCCCTTATAATAGCTA
CGTACCAGCCTATATCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCGACCATTTGTACAGGGTCAAGAGCTTTTACCTCAACTAATTCAAAATCGACAGT
TAGCTCCTATTCCAATGATTCCTATACAACCTCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCACGCTGGAGGAGTGGGACACTCAACTGAAAATTGT
TTGGCTTTGAAAAGAAAGGTGCAATCTCTAATTAATGTTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGCCGAATGTCAATGAAAATCCACTGCCTAATCATGAAAA
TCCAAAAGTGAAAGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAATGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAGGATATG
TTAGTCATGAATATCTAGACCCCAACATAAGATATGAAGGGTATGATGAAAGTAGACATTGTATATTCCATCAAGGAGTTGCAGGCTACGTTGTCCAACAGTGCCAAAAA
GTTAGATCCAAAGTACAACAACTTATGGATTCAAAGACACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGCTTTCATGGATGAAGT
TTCAGAAAAGGAATTCATAATGAGTCAACTTTACCAAGACCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAGACCGTTTAGACTTGCAACAAATGGAGAAGAAGAGTTTGGAAAGCTTCAAAGAATATGCTCGACGATGGAGAGATATGGCTGCCGAGGTTCAACCACTGTT
AACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGACTCCATTATATGAGCGAATGATTGGTAATGCATCAACAAAATTTTCTGATATTATTGTTATTGGCG
AAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAATTGAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAGGAGAGGTTCATGCA
ATTGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGGCTCTCATATCCCTTATAATAGCTA
CGTACCAGCCTATATCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCGACCATTTGTACAGGGTCAAGAGCTTTTACCTCAACTAATTCAAAATCGACAGT
TAGCTCCTATTCCAATGATTCCTATACAACCTCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCACGCTGGAGGAGTGGGACACTCAACTGAAAATTGT
TTGGCTTTGAAAAGAAAGGTGCAATCTCTAATTAATGTTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAAGCCGAATGTCAATGAAAATCCACTGCCTAATCATGAAAA
TCCAAAAGTGAAAGTTGTGGATAGCCTTGTTGAAAAGTGCAAAAATGAAGTCCATGAGATAGTGATGCCTATGGAAGCACTTTTTGAAGGTCTTTTTGAAGCAGGATATG
TTAGTCATGAATATCTAGACCCCAACATAAGATATGAAGGGTATGATGAAAGTAGACATTGTATATTCCATCAAGGAGTTGCAGGCTACGTTGTCCAACAGTGCCAAAAA
GTTAGATCCAAAGTACAACAACTTATGGATTCAAAGACACTCACGGTATATAGAGGACAAGGAAAAGACGAGATGAAAGACAGTAAAATATGTGCTTTCATGGATGAAGT
TTCAGAAAAGGAATTCATAATGAGTCAACTTTACCAAGACCTTTGA
Protein sequenceShow/hide protein sequence
MAPDRLDLQQMEKKSLESFKEYARRWRDMAAEVQPLLTDKEMTSMFMNTLRTPLYERMIGNASTKFSDIIVIGERIEYGIKHGRLAEATIEYGGIKKGTISKKKEGEVHA
IGFPNSGKHKSIFGQRKYEQNFPSYISNGSHIPYNSYVPAYIVSETPKPVNSNSPRPFVQGQELLPQLIQNRQLAPIPMIPIQPPYPKWYDSNARCDYHAGGVGHSTENC
LALKRKVQSLINVGWLSFKKSGEKPNVNENPLPNHENPKVKVVDSLVEKCKNEVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGYDESRHCIFHQGVAGYVVQQCQK
VRSKVQQLMDSKTLTVYRGQGKDEMKDSKICAFMDEVSEKEFIMSQLYQDL