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IVF0020416 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020416
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionB3 domain-containing transcription factor LEC2
Genome locationchr08:1853358..1853738
RNA-Seq ExpressionIVF0020416
SyntenyIVF0020416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052680.1 B3 domain-containing transcription factor LEC2 [Cucumis melo var. makuwa]1.50e-85100Show/hide
Query:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG
        MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG
Subjt:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG

Query:  GLDTLPEVSGFKFPLFDYFPGNNGTT
        GLDTLPEVSGFKFPLFDYFPGNNGTT
Subjt:  GLDTLPEVSGFKFPLFDYFPGNNGTT

KAG6604454.1 B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. sororia]5.44e-1546.03Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNN---------INYKEQVILDDFQG---------INNDNN--NGNV---------
        +KDEEEDASLA+LIEELKHK ED         +T+  +N+  H  NN         ++   Q    D  G         INN+N   NGN          
Subjt:  VKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNN---------INYKEQVILDDFQG---------INNDNN--NGNV---------

Query:  -GFEDCFGGLDTLPEVSGFKFPLFDY
         G EDCF GLDTLPEVSGFKFPLFDY
Subjt:  -GFEDCFGGLDTLPEVSGFKFPLFDY

KAG7034599.1 B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.11e-1546.09Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHH-----------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQG---------INNDNN--NGNV-------
        +KDEEEDASLA+LIEELKHK ED             S+   +   N  NNA++ S + ++   Q    D  G         INN+N   NGN        
Subjt:  VKDEEEDASLALLIEELKHKAEDHH-----------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQG---------INNDNN--NGNV-------

Query:  ---GFEDCFGGLDTLPEVSGFKFPLFDY
           G EDCF GLDTLPEVSGFKFPLFDY
Subjt:  ---GFEDCFGGLDTLPEVSGFKFPLFDY

KGN49235.1 hypothetical protein Csa_002728 [Cucumis sativus]4.69e-6784.38Show/hide
Query:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNN---NGNVGFED
        MEE+YKQKQ QQFSLSSNI+DQVKDEEEDASLALLIEELKHKAEDHHSHP  +F  N P N MI+STN+INYKEQ+ILDDFQGINN NN   NGNVGFED
Subjt:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNN---NGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT
        CFGGLDTLPEVSGFKFPLFDYF  NNGT
Subjt:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT

XP_011658520.1 B3 domain-containing transcription factor LEC2 [Cucumis sativus]2.47e-6384.38Show/hide
Query:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNN---NGNVGFED
        MEE+YKQKQ QQFSLSSNI+DQVKDEEEDASLALLIEELKHKAEDHHSHP  +F  N P N MI+STN+INYKEQ+ILDDFQGINN NN   NGNVGFED
Subjt:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNN---NGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT
        CFGGLDTLPEVSGFKFPLFDYF  NNGT
Subjt:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT

TrEMBL top hitse value%identityAlignment
A0A0A0KHN2 Uncharacterized protein3.6e-5184.38Show/hide
Query:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQG---INNDNNNGNVGFED
        MEE+YKQKQ QQFSLSSNI+DQVKDEEEDASLALLIEELKHKAEDHHSHP  +F  N P N MI+STN+INYKEQ+ILDDFQG   INND NNGNVGFED
Subjt:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQG---INNDNNNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT
        CFGGLDTLPEVSGFKFPLFDYF  NNGT
Subjt:  CFGGLDTLPEVSGFKFPLFDYFPGNNGT

A0A5A7UBY7 B3 domain-containing transcription factor LEC23.3e-65100Show/hide
Query:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG
        MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG
Subjt:  MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFG

Query:  GLDTLPEVSGFKFPLFDYFPGNNGTT
        GLDTLPEVSGFKFPLFDYFPGNNGTT
Subjt:  GLDTLPEVSGFKFPLFDYFPGNNGTT

A0A6J1EJR4 B3 domain-containing transcription factor LEC24.3e-1242.36Show/hide
Query:  ENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDH--------HSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGI----------
        +N   K  QQ S ++     +KDEEEDASLA+LIEELKHK ED          +      + N  NNA++ S + ++   Q    D  G           
Subjt:  ENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDH--------HSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGI----------

Query:  NNDNNNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDY
        NN   NGN           G EDCF GLDTLPEVSGFKFPLFDY
Subjt:  NNDNNNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDY

A0A6J1IQY4 B3 domain-containing transcription factor LEC2 isoform X14.3e-1244.8Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHH-------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDD-------FQGINNDNNNGNV---------------
        +KDEEEDASLA+LIEELKHK ED         S      ++N  NNA++ S + ++  +Q             +GI+N NNN                  
Subjt:  VKDEEEDASLALLIEELKHKAEDHH-------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDD-------FQGINNDNNNGNV---------------

Query:  GFEDCFGGLDTLPEVSGFKFPLFDY
        G EDCF GLDTLPEVSGFKFPLFDY
Subjt:  GFEDCFGGLDTLPEVSGFKFPLFDY

A0A6J1IU08 B3 domain-containing transcription factor LEC2 isoform X24.3e-1244.8Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHH-------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDD-------FQGINNDNNNGNV---------------
        +KDEEEDASLA+LIEELKHK ED         S      ++N  NNA++ S + ++  +Q             +GI+N NNN                  
Subjt:  VKDEEEDASLALLIEELKHKAEDHH-------SHPPPYFATNLPNNAMIHSTNNINYKEQVILDD-------FQGINNDNNNGNV---------------

Query:  GFEDCFGGLDTLPEVSGFKFPLFDY
        G EDCF GLDTLPEVSGFKFPLFDY
Subjt:  GFEDCFGGLDTLPEVSGFKFPLFDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAATTACAAGCAGAAGCAGCTGCAACAATTTAGTTTGTCGTCAAATATAGATGATCAGGTTAAAGACGAAGAAGAAGATGCTTCTTTGGCTTTGTTGATCGA
AGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCCCGCCCTATTTCGCTACTAATCTACCCAACAATGCTATGATTCATTCCACAAATAATATCAATTATAAGG
AACAAGTAATATTAGATGATTTCCAAGGGATTAATAATGATAATAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGA
TTCAAGTTCCCTCTTTTTGACTATTTCCCCGGTAATAATGGCACAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAATTACAAGCAGAAGCAGCTGCAACAATTTAGTTTGTCGTCAAATATAGATGATCAGGTTAAAGACGAAGAAGAAGATGCTTCTTTGGCTTTGTTGATCGA
AGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCCCGCCCTATTTCGCTACTAATCTACCCAACAATGCTATGATTCATTCCACAAATAATATCAATTATAAGG
AACAAGTAATATTAGATGATTTCCAAGGGATTAATAATGATAATAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGA
TTCAAGTTCCCTCTTTTTGACTATTTCCCCGGTAATAATGGCACAACCTGA
Protein sequenceShow/hide protein sequence
MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFGGLDTLPEVSG
FKFPLFDYFPGNNGTT