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IVF0020418 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020418
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:13520357..13520575
RNA-Seq ExpressionIVF0020418
SyntenyIVF0020418
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041583.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.55e-2979.17Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDET A+FNV V+DLANE F LGEKI + KMVQKVLRSLP RFSMK+T IEEANDITTMKLDELFG L +
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

KAA0050148.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.19e-39100Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

KAA0056045.1 Receptor-like protein 12 [Cucumis melo var. makuwa]7.18e-3077.46Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR
        M  +ETIAKFNVRV+D A ESF LGEKI+K+KMVQKVLRSLP RF+MK+TAI+EAND+T+MKLDELFGSL+
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR

KAA0063933.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.53e-3285.92Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR
        MNDDETIA FNV VLDLANESF   EKI +SKMV+KVLRSLPSRFSMK+TAIEEAND+TTMKLDELFGSLR
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR

TYK19673.1 Receptor-like protein 12 [Cucumis melo var. makuwa]4.38e-3079.17Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDET A+FNV V+DLANE F LGEKI + KMVQKVLRSLP RFSMK+T IEEANDITTMKLDELFG L +
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

TrEMBL top hitse value%identityAlignment
A0A5A7TEK2 Receptor-like protein 122.2e-2179.17Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDET A+FNV V+DLANE F LGEKI + KMVQKVLRSLP RFSMK+T IEEANDITTMKLDELFG L +
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

A0A5A7U4G8 Gag-proteinase polyprotein1.3e-29100Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

A0A5A7UZ92 Gag-proteinase polyprotein2.2e-2176.06Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR
        M+DDETI  FNVRVLD+ANESF LGEK++K+K+V+KVLRSLP RF+MK+TAI+EAND+TT KLD LFGSLR
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR

A0A5A7V748 Receptor-like protein 124.0e-2385.92Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR
        MNDDETIA FNV VLDLANESF   EKI +SKMV+KVLRSLPSRFSMK+TAIEEAND+TTMKLDELFGSLR
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLR

A0A5D3D849 Receptor-like protein 122.2e-2179.17Show/hide
Query:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV
        MNDDET A+FNV V+DLANE F LGEKI + KMVQKVLRSLP RFSMK+T IEEANDITTMKLDELFG L +
Subjt:  MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATGATGAAACTATAGCAAAATTCAACGTTCGGGTGCTGGATCTGGCTAATGAATCGTTCACCCTTGGCGAGAAAATCGCTAAATCCAAGATGGTGCAGAAAGT
TCTAAGGTCCCTCCCTTCTAGGTTTAGCATGAAAATGACGGCTATTGAAGAAGCTAATGACATAACCACTATGAAGTTAGATGAGTTGTTTGGATCGTTACGTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGATGATGAAACTATAGCAAAATTCAACGTTCGGGTGCTGGATCTGGCTAATGAATCGTTCACCCTTGGCGAGAAAATCGCTAAATCCAAGATGGTGCAGAAAGT
TCTAAGGTCCCTCCCTTCTAGGTTTAGCATGAAAATGACGGCTATTGAAGAAGCTAATGACATAACCACTATGAAGTTAGATGAGTTGTTTGGATCGTTACGTGTCTGA
Protein sequenceShow/hide protein sequence
MNDDETIAKFNVRVLDLANESFTLGEKIAKSKMVQKVLRSLPSRFSMKMTAIEEANDITTMKLDELFGSLRV