; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020436 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020436
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationchr12:20206311..20208722
RNA-Seq ExpressionIVF0020436
SyntenyIVF0020436
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]5.97e-14195.63Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]5.11e-150100Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SFQRAFDQNSIVATVAVICITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

XP_022140053.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]2.37e-12382.97Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGIATA INK+++RGL+  CYAMP+  R +QW+STIS VVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SF+RAFDQNSIVAT AV+C+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]3.78e-12283.84Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+  +T  INKK+ RGLSA CYAMP++ R LQW+STISSV+L
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SF+RAFDQNSIVATVA+IC+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]1.47e-13390.39Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSEGIATA I KK++RGLSA CYAMPVN RTLQW+STISS VL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SF+RAFDQNSIVATVAVIC TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.1e-10995.63Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE     GINKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like1.5e-116100Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SFQRAFDQNSIVATVAVICITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 21.5e-116100Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SFQRAFDQNSIVATVAVICITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like3.0e-9682.97Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGIATA INK+++RGL+  CYAMP+  R +QW+STIS VVL
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SF+RAFDQNSIVAT AV+C+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.5e-9583.84Show/hide
Query:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL
        MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+  +T  INKK+ RGLSA CYAMP++ R LQW+STISSV+L
Subjt:  MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVICITAVSFLFVI
        SF+RAFDQNSIVATVA+IC+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVICITAVSFLFVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic1.5e-6056.71Show/hide
Query:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIAT--AGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSV
        +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR +   +  AT  A   K++ RG S  CYA P ++   LQW+STIS V
Subjt:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIAT--AGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI
        AG+ Q+AFDQNS++ATVA+I +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI

O23164 Cold-regulated 413 plasma membrane protein 48.8e-1332.17Show/hide
Query:  TRTLQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic3.7e-5952.81Show/hide
Query:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRFAVGSEGIATAG--INKKKNRGLSAACYAMPVNTRTLQWVSTISSV
        +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR +   +  AT    + K++ RG S  CYA P++  +LQW+STIS +
Subjt:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRFAVGSEGIATAG--INKKKNRGLSAACYAMPVNTRTLQWVSTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LMLA+GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI
        AGS ++A+++ S++ATVA+I +T VS L ++
Subjt:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 23.7e-1130Show/hide
Query:  LQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI
        +ISL I  YL  +H   +G F+ +F Q   +  T+ +I +
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI

Q9XIM7 Cold-regulated 413 plasma membrane protein 18.3e-1132.87Show/hide
Query:  TRTLQWVSTISSVVLMLAK----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  L+WV++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R + 
Subjt:  TRTLQWVSTISSVVLMLAK----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI
         G  I L I  YL  +H   +G F+ AF + N I  TV +IC+
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 21.1e-6156.71Show/hide
Query:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIAT--AGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSV
        +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR +   +  AT  A   K++ RG S  CYA P ++   LQW+STIS V
Subjt:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIAT--AGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI
        AG+ Q+AFDQNS++ATVA+I +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI

AT1G29390.2 cold regulated 314 thylakoid membrane 21.2e-5766.47Show/hide
Query:  TAGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K++ RG S  CYA P ++   LQW+STIS V LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAGINKKKNRGLSAACYAMP-VNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI
        LVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA+I +T VSFLF+I
Subjt:  LVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 12.6e-6052.81Show/hide
Query:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRFAVGSEGIATAG--INKKKNRGLSAACYAMPVNTRTLQWVSTISSV
        +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR +   +  AT    + K++ RG S  CYA P++  +LQW+STIS +
Subjt:  VCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRFAVGSEGIATAG--INKKKNRGLSAACYAMPVNTRTLQWVSTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LMLA+GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI
        AGS ++A+++ S++ATVA+I +T VS L ++
Subjt:  AGSFQRAFDQNSIVATVAVICITAVSFLFVI

AT3G50830.1 cold-regulated 413-plasma membrane 22.6e-1230Show/hide
Query:  LQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI
        +ISL I  YL  +H   +G F+ +F Q   +  T+ +I +
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI

AT4G37220.1 Cold acclimation protein WCOR413 family6.3e-1432.17Show/hide
Query:  TRTLQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWVSTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVICI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTACCCTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCGAATGCGAAGCT
CTCGTTAAATTCTGCCGCTAAACAGAGTTCGATTTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAAGAATCGTG
GTTTAAGTGCTGCTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGGTCTCAACCATATCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAG
TCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGGATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTT
CTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGTGCATTATCT
CCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTATT
ACTGCTGTTTCATTCCTGTTTGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
CTTCGCTTGACATCATCAGAACTTAACAAATTTTCTTATCAGTAACAAATGAGGTTTAGGATTTGTTGATTCCATTTTATCTTCATCTCTACTATCTACGTAGACCTCGT
TTTCATCACTTTGTCGGGCTTAAAGGACGCCTTCCGTTAATTGATTGTGCTTTTGGATTCGTTATTTCTGGAAGTTTCTTCTAAAAATTGAATTTTTAGAAGTTATTCTC
ATACTTTACTAAAAAAATTGTGACGGTTTGATGAACACTTCCTTAGCGGTTTTGGGGAGGGCAGCCGGTTCCGGTTTTGGTTTTGTTCAAGTTCATCAGTTGTACGGGTG
ACAGTTTGGTTGTTGAATCAAAAACTAGAGAATCAAGATCACTGTTTCAATTTCATTTCCAAATCCGAGAGAAGATAAAGGCCGAATCAAGCGAAGGAGGAAGAGGGGAA
ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTACCCTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCGAATGCGAAGCT
CTCGTTAAATTCTGCCGCTAAACAGAGTTCGATTTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAAGAATCGTG
GTTTAAGTGCTGCTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGGTCTCAACCATATCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAG
TCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGGATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTT
CTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGTGCATTATCT
CCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTATT
ACTGCTGTTTCATTCCTGTTTGTGATCTGAGTTCCTTAGTCACTCCCAAGTAAACCTTACGGGTTAAATCTTCAATAAACACTATTGGTTGTCCTGTAATAGTTACAGAA
TAGTTAGAATGTACAGACCTTCCTTTTCATGTTTATAAATACTATAAAGAAATGTTTATTTCTTTAGCTTGTTTGATCTAATCATCATCCTGTTTCTCTTTTTAGTTATC
ACAAAATTGCATTGGTTTGAACCTAGACAATTACTTGTTTCCCTTCCAAATAACATCAGCACTAACTAGTTATATATGGCAGTTCGTGAACTTTCAATCTATCATCTGCT
GTTTGTTGCATAATTTGTACATTGTACAGCAAACAATCTTAAATTGGACAAAGTTGTCATTAATAGGTAAAACTAAATGAACTCGTGCAAGCTGAAGTTCGAGTACAATG
CCTCTTCCCT
Protein sequenceShow/hide protein sequence
MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQK
SFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICI
TAVSFLFVI