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IVF0020492 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020492
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr05:15883943..15884143
RNA-Seq ExpressionIVF0020492
SyntenyIVF0020492
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045611.1 gag protease polyprotein [Cucumis melo var. makuwa]1.56e-0441.27Show/hide
Query:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSS--FRFLLQEGHDVDKCPLRSI
        +D+   E  + SK++ + +++ Q+RK EQQP  +P R  RS   FR   QEGH  D+CP+R I
Subjt:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSS--FRFLLQEGHDVDKCPLRSI

KAA0055515.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.06e-0442.62Show/hide
Query:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSFRF--LLQEGHDVDKCPLR
        +D+   E  + SK + + +++ QKRKAEQQP  +P R  RS   F    QEGH  D+CP+R
Subjt:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSFRF--LLQEGHDVDKCPLR

TYJ95735.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.06e-0442.62Show/hide
Query:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSFRF--LLQEGHDVDKCPLR
        +D+   E  + SK + + +++ QKRKAEQQP  +P R  RS   F    QEGH  D+CP+R
Subjt:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSFRF--LLQEGHDVDKCPLR

TYK28660.1 gag protease polyprotein [Cucumis melo var. makuwa]5.25e-20100Show/hide
Query:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF
        MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF
Subjt:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF

TrEMBL top hitse value%identityAlignment
A0A5D3DZJ0 Gag protease polyprotein4.8e-15100Show/hide
Query:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF
        MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF
Subjt:  MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGAGGGCACATGAGAATGATGACCTGTCGAAGATGTCATGGAAGGAAGCATCCACAAGGCAGAAGAGAAAGGCTGAGCAACAGCCTGCTGATATCCCATGGAG
GACTTTAAGATCATCATTCAGGTTTCTATTGCAAGAGGGGCACGATGTCGACAAATGCCCTCTCAGATCTATTAGAGTTATTCTAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGTGAGGGCACATGAGAATGATGACCTGTCGAAGATGTCATGGAAGGAAGCATCCACAAGGCAGAAGAGAAAGGCTGAGCAACAGCCTGCTGATATCCCATGGAG
GACTTTAAGATCATCATTCAGGTTTCTATTGCAAGAGGGGCACGATGTCGACAAATGCCCTCTCAGATCTATTAGAGTTATTCTAAACTAG
Protein sequenceShow/hide protein sequence
MDVRAHENDDLSKMSWKEASTRQKRKAEQQPADIPWRTLRSSFRFLLQEGHDVDKCPLRSIRVILN