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IVF0020504 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020504
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationchr09:19367430..19368355
RNA-Seq ExpressionIVF0020504
SyntenyIVF0020504
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]9.61e-7980Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRR RALP+ KKRDDHK LSRSNTLKDLFVSSPPY  +D +++ET   
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        AP +N TPVC +E  +G +G  GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_008467191.1 PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo]2.21e-110100Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_011655483.1 uncharacterized protein LOC105435544 [Cucumis sativus]2.80e-9993.55Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LPENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVT
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT+N TPVCEKEKEEG VGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]5.80e-8080Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRR RALP+ KKRDDHK LSRSNTLKDLFVSSPPY  ++C+++ET   
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        AP +N TPVC +E  +G +G  GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_038875200.1 uncharacterized protein LOC120067717 [Benincasa hispida]5.02e-8889.03Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP R RALPE KKRDDHK LSRSNTLKDLFVSSPPYV TD D+HETAV 
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT++AT VC KEKE+G VGS GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein1.5e-7593.55Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LPENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVT
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT+N TPVCEKEKEEG VGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A1S3CSY3 uncharacterized protein LOC1035045995.1e-84100Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A5D3BMD8 Uncharacterized protein5.1e-84100Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A6J1DFV6 uncharacterized protein LOC1110200648.3e-5880.13Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALP+ K+  DH  L+RSNTLKDLFVSSPPY G D ++ E A T
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  A-PTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        A  + N  PVC KEKE+G VGS GW PGSPRP WTGFRYKYLLRKTWRPVL GIPE
Subjt:  A-PTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A6J1HGM7 uncharacterized protein LOC1114633734.8e-5878.06Show/hide
Query:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRR RALP+ KKRDDHK LSRSNTLKDLFVSSPPY  +D +++ET   
Subjt:  MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        AP +N TPVC   +E+G +G   W+PGSPRPGWTGFR+KYLLRKTWRP+L  IPE
Subjt:  APTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown2.7e-1643.71Show/hide
Query:  SLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPY----------VGTD
        SL KFKLL TH   VA+SPT     SP++HLRRRK TLR+LLTR+S R R P     + E+KK D    +  S  L DLFVSSPP+           GT 
Subjt:  SLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPY----------VGTD

Query:  CDV---HETAVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
         +V    +  V   + NA        EE      G+N GS RP  +      LLR++WRPVLV IPE
Subjt:  CDV---HETAVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

AT1G68430.1 unknown protein2.2e-1038.61Show/hide
Query:  MASLLKFKLLPTHYCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHET
        MA+L +FK L T  CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+  S  R  ++P           HK ++    LKDLFVSS        +    
Subjt:  MASLLKFKLLPTHYCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHET

Query:  AVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
              +    +  K     R+           P W GF  K LL++ WRP L  I E
Subjt:  AVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

AT5G16200.1 50S ribosomal protein-related2.6e-1136.99Show/hide
Query:  MASLLKFKLLPTH---YCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPE---------NKKRDDHKGLSRSNTLKDLFVS--SPP
        ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  R     + L E         NKKR +H+   R   L++L V+  SPP
Subjt:  MASLLKFKLLPTH---YCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPE---------NKKRDDHKGLSRSNTLKDLFVS--SPP

Query:  YVGTDCDV----HETAVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        Y G + D+     E +  +P    +    +E    R GS G            FR + +LRK WRPVLV IPE
Subjt:  YVGTDCDV----HETAVTAPTQNATPVCEKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCTTCTCAAATTCAAGCTCCTCCCGACGCACTACTGCGGCGTTGCTCAGAGTCCCACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGCCGGAA
AACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCCCCGCGCCTTACCGGAGAATAAGAAGAGAGACGACCATAAGGGTTTGTCGCGGA
GTAACACGTTGAAGGATTTGTTCGTTTCGTCTCCACCGTATGTTGGGACTGACTGTGATGTTCACGAGACGGCGGTCACGGCTCCAACCCAGAACGCAACTCCAGTTTGT
GAGAAGGAGAAGGAGGAGGGTCGCGTTGGATCGCCCGGTTGGAATCCCGGTTCTCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCG
GCCGGTGCTCGTCGGAATCCCCGAGTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAAGAAAAAAAAAAAAAAAAAAAACAAAACCCCCAATTCCCAACGCTCTCAAAAATCCTCTCCGAATTCCCTTCTTCAATCATTACAAAATTTTTCAAATTCCATTC
CAAAACTCCATTGATCGATTCAATAATTCTTCTCCCCCTGAGCTTTCTCCATGGCGTCGCTTCTCAAATTCAAGCTCCTCCCGACGCACTACTGCGGCGTTGCTCAGAGT
CCCACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGCCGGAAAACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCCCCG
CGCCTTACCGGAGAATAAGAAGAGAGACGACCATAAGGGTTTGTCGCGGAGTAACACGTTGAAGGATTTGTTCGTTTCGTCTCCACCGTATGTTGGGACTGACTGTGATG
TTCACGAGACGGCGGTCACGGCTCCAACCCAGAACGCAACTCCAGTTTGTGAGAAGGAGAAGGAGGAGGGTCGCGTTGGATCGCCCGGTTGGAATCCCGGTTCTCCTAGA
CCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGTGCTCGTCGGAATCCCCGAGTAATGGATGATCTTAAACATCTTTTAATTAATTTA
AAAATATATCTAATCTAATATTTCTATGTTTTTTTTAAGTATAGTTTTCGATCTTTTACTTAAAATAGGGATGGGGGAAGGATTAAGATCTTAATCAAGTGGGTTTGGGG
AAATAATAATTTGTTACTATGGAAAATTATGAATAGATTTCCCATGACTGGGAATTTGCTTATTTTTCTGTCAAATTTTACGTTTGATTTTATTTTTCTAATCATATATT
AAATTAGTCAAATTAACTTTATACAATTTGTACTTCCAAATTTAAG
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVC
EKEKEEGRVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE