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IVF0020529 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020529
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr06:16140869..16141108
RNA-Seq ExpressionIVF0020529
SyntenyIVF0020529
Gene Ontology termsNA
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043066.1 pol protein [Cucumis melo var. makuwa]9.54e-4994.94Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMR RYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

KAA0053367.1 pol protein [Cucumis melo var. makuwa]2.15e-4897.44Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE

KAA0054732.1 pol protein [Cucumis melo var. makuwa]2.15e-4897.44Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE

KAA0059496.1 pol protein [Cucumis melo var. makuwa]2.15e-4898.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPEL EG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

KAA0059750.1 pol protein [Cucumis melo var. makuwa]2.20e-4893.67Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQP+E+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYP+LFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

TrEMBL top hitse value%identityAlignment
A0A5A7SSB3 Pol protein9.1e-3796.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLW+NHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7T8G8 Reverse transcriptase3.1e-3797.47Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7TGX4 Reverse transcriptase1.2e-3696.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7UDB1 Reverse transcriptase1.2e-3696.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE+LAREVKTLR+KEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7UZZ4 Pol protein3.1e-3798.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDEN+SYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACCGAACAGCCCGTTGAGATACTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAAATTGATGAAAACTTGAGCTATACCGAACAGCCCGTTGAGATACTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGGTAA
Protein sequenceShow/hide protein sequence
MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG