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IVF0020542 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020542
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr02:7704374..7704550
RNA-Seq ExpressionIVF0020542
SyntenyIVF0020542
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036625.1 PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa]5.36e-2580Show/hide
Query:  MQGMYARQSQATEE--TLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        +QGMYAR+SQA EE  TL EEDED+H DTL  AC ENYA DEFWICCDICEKWFHGKFVV
Subjt:  MQGMYARQSQATEE--TLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
KAA0055918.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]6.19e-3598.28Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV+
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
TYK28121.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]4.33e-3598.28Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV+
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
TYK29017.1 PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa]4.22e-2583.05Show/hide
Query:  MQGMYARQSQATEETLS-EEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        MQG  ARQSQATEE  + EEDEDEHGDTL RAC ENYASDEFWICCDI E WFHGKFVV
Subjt:  MQGMYARQSQATEETLS-EEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]4.43e-2586.44Show/hide
Query:  MQGMYARQSQATEE--TLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        MQGMYARQSQA EE  TL EEDEDEHGDTL  AC ENYASDEFWICCDICEKWFHGK V
Subjt:  MQGMYARQSQATEE--TLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein1.7e-1986.44Show/hide
Query:  MQGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        MQGMYARQSQA E  ETL EEDEDEHGDTL  AC ENYASDEFWICCDICEKWFHGK V
Subjt:  MQGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
A0A1S3CI87 PHD finger protein ALFIN-LIKE 3-like isoform X16.3e-1986.21Show/hide
Query:  QGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        QGMYARQSQA E  ETL EEDEDEHGDTL  AC ENYASDEFWICCDICEKWFHGK V
Subjt:  QGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
A0A5A7ULG0 PHD finger protein ALFIN-LIKE 3-like isoform X24.1e-2698.28Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV+
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X26.3e-1986.21Show/hide
Query:  QGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        QGMYARQSQA E  ETL EEDEDEHGDTL  AC ENYASDEFWICCDICEKWFHGK V
Subjt:  QGMYARQSQATE--ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
A0A5D3DWW0 PHD finger protein ALFIN-LIKE 3-like isoform X24.1e-2698.28Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
        MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV+
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV
SwissProt top hitse value%identityAlignment
B8B8C5 PHD finger protein ALFIN-LIKE 95.5e-1275.68Show/hide
Query:  EDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        E+EHG+TL  AC E+Y +DEFWICCDICEKWFHGK V
Subjt:  EDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
O81488 PHD finger protein ALFIN-LIKE 41.1e-1268.89Show/hide
Query:  EETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        EE + EEDEDE G+T   AC E+YA+DEFWICCD+CE WFHGK V
Subjt:  EETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
Q5XEM9 PHD finger protein ALFIN-LIKE 57.7e-1472.73Show/hide
Query:  ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        E   +EDEDEHG+TL  AC +NYASDEFWICCD+CEKWFHG+ V
Subjt:  ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
Q6YTY3 PHD finger protein ALFIN-LIKE 95.5e-1275.68Show/hide
Query:  EDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        E+EHG+TL  AC E+Y +DEFWICCDICEKWFHGK V
Subjt:  EDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
Q9M2B4 PHD finger protein ALFIN-LIKE 31.4e-1256.86Show/hide
Query:  RQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        +Q +  +E + E+DED+HG+TL  AC ++  +DEFWICCD+CEKWFHGK V
Subjt:  RQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
Arabidopsis top hitse value%identityAlignment
AT3G42790.1 alfin-like 31.0e-1356.86Show/hide
Query:  RQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        +Q +  +E + E+DED+HG+TL  AC ++  +DEFWICCD+CEKWFHGK V
Subjt:  RQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
AT5G05610.1 alfin-like 16.7e-1352.63Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        ++G      +  EE+  +ED DEHGDTL  +C  NY +DEFWICCD+CE+W+HGK V
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
AT5G05610.2 alfin-like 16.7e-1352.63Show/hide
Query:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        ++G      +  EE+  +ED DEHGDTL  +C  NY +DEFWICCD+CE+W+HGK V
Subjt:  MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
AT5G20510.1 alfin-like 55.5e-1572.73Show/hide
Query:  ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        E   +EDEDEHG+TL  AC +NYASDEFWICCD+CEKWFHG+ V
Subjt:  ETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
AT5G26210.1 alfin-like 47.9e-1468.89Show/hide
Query:  EETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV
        EE + EEDEDE G+T   AC E+YA+DEFWICCD+CE WFHGK V
Subjt:  EETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAATGTATGCAAGGCAGTCGCAAGCAACGGAAGAGACGTTGTCTGAAGAAGATGAAGACGAGCATGGTGATACCTTACGTAGGGCATGCGTTGAGAACTATGC
TTCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAATGGTTTCATGGGAAATTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAATGTATGCAAGGCAGTCGCAAGCAACGGAAGAGACGTTGTCTGAAGAAGATGAAGACGAGCATGGTGATACCTTACGTAGGGCATGCGTTGAGAACTATGC
TTCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAATGGTTTCATGGGAAATTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MQGMYARQSQATEETLSEEDEDEHGDTLRRACVENYASDEFWICCDICEKWFHGKFVV