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IVF0020544 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020544
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr01:18263117..18263269
RNA-Seq ExpressionIVF0020544
SyntenyIVF0020544
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]1.97e-0972.97Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKR
        MANACKE+F D+L+ SKITS IC+ KGEQVWV GT+R
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKR

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]6.23e-0856.25Show/hide
Query:  NACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK
        N C+EEF D LHF KITS IC  +  QVW +G +R   L EKFY  YK
Subjt:  NACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK

KAA0051792.1 hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]2.72e-0758.33Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP
        M NA KEEF DKLH   ITS IC+LKGEQVW   T    P   KF+ P
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]3.47e-1364Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK
        MAN CKEEF+  LH  +ITS  C+ KGEQVWVL  +R  PLKEK+YK YK
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK

TYK21449.1 hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]2.21e-0758.33Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP
        M NA KEEF DKLH   ITS IC+LKGEQVW   T    P   KF+ P
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP

TrEMBL top hitse value%identityAlignment
A0A5A7U7Q4 Uncharacterized protein2.2e-0458.33Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP
        M NA KEEF DKLH   ITS IC+LKGEQVW   T    P   KF+ P
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP

A0A5D3C951 Uncharacterized protein1.3e-0964Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK
        MAN CKEEF+  LH  +ITS  C+ KGEQVWVL  +R  PLKEK+YK YK
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein4.5e-0556.25Show/hide
Query:  NACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK
        N C+EEF D LHF KITS IC  +  QVW +G +R   L EKFY  YK
Subjt:  NACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein1.1e-0672.97Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKR
        MANACKE+F D+L+ SKITS IC+ KGEQVWV GT+R
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKR

A0A5D3DDR8 Uncharacterized protein2.2e-0458.33Show/hide
Query:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP
        M NA KEEF DKLH   ITS IC+LKGEQVW   T    P   KF+ P
Subjt:  MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACGCATGTAAGGAAGAGTTTGAAGACAAACTCCACTTTAGTAAGATAACTTCCACCATTTGTATCTTGAAAGGAGAACAAGTGTGGGTTTTAGGCACCAAGAG
GTCGACACCTTTAAAAGAGAAGTTCTATAAGCCTTATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACGCATGTAAGGAAGAGTTTGAAGACAAACTCCACTTTAGTAAGATAACTTCCACCATTTGTATCTTGAAAGGAGAACAAGTGTGGGTTTTAGGCACCAAGAG
GTCGACACCTTTAAAAGAGAAGTTCTATAAGCCTTATAAGTGA
Protein sequenceShow/hide protein sequence
MANACKEEFEDKLHFSKITSTICILKGEQVWVLGTKRSTPLKEKFYKPYK