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IVF0020546 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020546
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr12:8744643..8745078
RNA-Seq ExpressionIVF0020546
SyntenyIVF0020546
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026133.1 hypothetical protein E6C27_scaffold19G00840 [Cucumis melo var. makuwa]2.00e-3562.99Show/hide
Query:  SHQLSSRAKFKILGRF-CVT------NSKMVENQ-------RSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLS
        SHQLSSRAKFKILG+  CV        S + E Q        + LSREE DQFLL KNS+MT+I  AKSE DLQAVM+ V+NNN  D KQD  EDITNLS
Subjt:  SHQLSSRAKFKILGRF-CVT------NSKMVENQ-------RSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLS

Query:  DSSINDIDFENDPYYNFDISDLYLDFQ
        +SS+NDIDFEN+PYYNFDI D YL+ Q
Subjt:  DSSINDIDFENDPYYNFDISDLYLDFQ

KAA0050626.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.77e-5367.36Show/hide
Query:  YRFSLYFQLPWILCWSHQLSSRAKFKILGRF------------CVTNSKMVE--NQRSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNF
        YRFSLYFQ+PWI CW HQLSSRAKFKILG+             C+   ++ +     + LSREE DQFLLAKNSIMTSIA AKSE DLQAVME V+NNN 
Subjt:  YRFSLYFQLPWILCWSHQLSSRAKFKILGRF------------CVTNSKMVE--NQRSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNF

Query:  ADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
         DNKQD+ EDI N+SDSS+NDIDF NDPYYNFDISDLYLD Q G
Subjt:  ADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

KAA0051819.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.65e-4056.55Show/hide
Query:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFCVTN---------------SKMVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNN
        MYRFSLYFQ+ WI  W HQLSSRAKFKI G+                    +K  +     L  EEDQFLLAKNSIMTSIA AKSE DLQA+M+ V++N 
Subjt:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFCVTN---------------SKMVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNN

Query:  FADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
        F DNK+D+ ED    SDSS+N+ID +ND YYNFDI D YLD Q G
Subjt:  FADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

KAA0052120.1 hypothetical protein E6C27_scaffold578G001120 [Cucumis melo var. makuwa]1.54e-54100Show/hide
Query:  MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
        MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
Subjt:  MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

KGN53659.1 hypothetical protein Csa_014527 [Cucumis sativus]2.27e-3657.25Show/hide
Query:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFC---------VTNSKMVE--NQRSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFAD
        MYRFSLYFQ+ WI  WSHQLS+RAKFKIL +           V   K+ +     + LS+EE DQFLL KNSIMT IA AKSE DLQ VME VI+  + D
Subjt:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFC---------VTNSKMVE--NQRSSLSREE-DQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFAD

Query:  NKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLD
        +K+++ ED    S+S  NDIDF+NDPYYNFDISD Y D
Subjt:  NKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLD

TrEMBL top hitse value%identityAlignment
A0A0A0KXT5 Uncharacterized protein1.1e-2657.25Show/hide
Query:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRF---------CVTNSKMVE--NQRSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFAD
        MYRFSLYFQ+ WI  WSHQLS+RAKFKIL +           V   K+ +     + LS+ EEDQFLL KNSIMT IA AKSE DLQ VME VI+  + D
Subjt:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRF---------CVTNSKMVE--NQRSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFAD

Query:  NKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLD
        +K+++ ED    S+S  NDIDF+NDPYYNFDISD Y D
Subjt:  NKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLD

A0A5A7U8X4 Retrotransposable element Tf23.8e-4067.36Show/hide
Query:  YRFSLYFQLPWILCWSHQLSSRAKFKILGRF------------CVTNSKMVE--NQRSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNF
        YRFSLYFQ+PWI CW HQLSSRAKFKILG+             C+   ++ +     + LSR EEDQFLLAKNSIMTSIA AKSE DLQAVME V+NNN 
Subjt:  YRFSLYFQLPWILCWSHQLSSRAKFKILGRF------------CVTNSKMVE--NQRSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNF

Query:  ADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
         DNKQD+ EDI N+SDSS+NDIDF NDPYYNFDISDLYLD Q G
Subjt:  ADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

A0A5A7UEA0 Retrotransposable element Tf23.6e-3056.55Show/hide
Query:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFCVTN---------------SKMVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNN
        MYRFSLYFQ+ WI  W HQLSSRAKFKI G+                    +K  +     L  EEDQFLLAKNSIMTSIA AKSE DLQA+M+ V++N 
Subjt:  MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFCVTN---------------SKMVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNN

Query:  FADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
        F DNK+D+ ED    SDSS+N+ID +ND YYNFDI D YLD Q G
Subjt:  FADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

A0A5D3BG31 Uncharacterized protein8.5e-40100Show/hide
Query:  MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
        MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG
Subjt:  MVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDFENDPYYNFDISDLYLDFQLG

A0A5D3CI63 Uncharacterized protein2.4e-2662.99Show/hide
Query:  SHQLSSRAKFKILGR-FCV------TNSKMVENQ-------RSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLS
        SHQLSSRAKFKILG+  CV        S + E Q        + LSR EEDQFLL KNS+MT+I  AKSE DLQAVM+ V+NNN  D KQD  EDITNLS
Subjt:  SHQLSSRAKFKILGR-FCV------TNSKMVENQ-------RSSLSR-EEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLS

Query:  DSSINDIDFENDPYYNFDISDLYLDFQ
        +SS+NDIDFEN+PYYNFDI D YL+ Q
Subjt:  DSSINDIDFENDPYYNFDISDLYLDFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATTCTCTCTTTACTTTCAACTGCCCTGGATTCTTTGTTGGAGTCATCAGCTTTCATCCAGAGCCAAATTCAAAATCTTAGGAAGATTTTGCGTAACAAATAG
CAAAATGGTTGAAAATCAACGCTCATCTCTCTCTCGAGAAGAAGATCAGTTTCTTCTCGCAAAGAACTCAATCATGACCTCAATTGCTGAAGCAAAGTCTGAAGTAGACC
TTCAGGCGGTCATGGAAATAGTCATCAACAATAATTTCGCCGACAACAAACAAGATAACACTGAAGATATTACAAATCTCTCAGATTCATCTATCAATGATATCGATTTT
GAAAATGATCCTTATTACAATTTTGATATTTCCGATCTCTATTTGGATTTCCAACTAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCGATTCTCTCTTTACTTTCAACTGCCCTGGATTCTTTGTTGGAGTCATCAGCTTTCATCCAGAGCCAAATTCAAAATCTTAGGAAGATTTTGCGTAACAAATAG
CAAAATGGTTGAAAATCAACGCTCATCTCTCTCTCGAGAAGAAGATCAGTTTCTTCTCGCAAAGAACTCAATCATGACCTCAATTGCTGAAGCAAAGTCTGAAGTAGACC
TTCAGGCGGTCATGGAAATAGTCATCAACAATAATTTCGCCGACAACAAACAAGATAACACTGAAGATATTACAAATCTCTCAGATTCATCTATCAATGATATCGATTTT
GAAAATGATCCTTATTACAATTTTGATATTTCCGATCTCTATTTGGATTTCCAACTAGGATGA
Protein sequenceShow/hide protein sequence
MYRFSLYFQLPWILCWSHQLSSRAKFKILGRFCVTNSKMVENQRSSLSREEDQFLLAKNSIMTSIAEAKSEVDLQAVMEIVINNNFADNKQDNTEDITNLSDSSINDIDF
ENDPYYNFDISDLYLDFQLG