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IVF0020549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:12200920..12201207
RNA-Seq ExpressionIVF0020549
SyntenyIVF0020549
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.82e-4282.29Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGA----KYWWRMEESR
        EEQLLDRLAQRL+SGIRSAQSD EKK+GIERLKALG  TF GTTNPADAEAWL LIEKCFRV RC EDRKVELA+FLLQNG     + WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGA----KYWWRMEESR

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.32e-4385.87Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQRLVSGIRSAQSD EKK+G ERLKALG  TFAGTTNP D EAWL LIEKCFRV R LEDRKVELAAFLLQN A+ WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]3.15e-4481.52Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQ LVSGIRSAQS+LEK F IERLKALG  TFAGTTN ADAEAWL LIEKCF+VMRCLEDRKVEL  FLL+NG + WWR+ ESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

KAA0063973.1 uncharacterized protein E6C27_scaffold616G001300 [Cucumis melo var. makuwa]7.18e-4790.59Show/hide
Query:  LAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        L +  +  IRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEE R
Subjt:  LAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]6.89e-4385.87Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQRLVSGIRSAQSD EKK+G ERLKALG  TFAGTTNP D EAWL LIEKCFRV R LEDRKVELAAFLLQN A+ WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.8e-3481.52Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQRL+ GIR AQSD EKK+GIERLKALG  TF GTTNP DAE WL LIEKCF+V RC EDRKVELAAFLLQNGA+ WW MEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

A0A5A7T1M0 Reverse transcriptase1.6e-3585.87Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQRLVSGIRSAQSD EKK+G ERLKALG  TFAGTTNP D EAWL LIEKCFRV R LEDRKVELAAFLLQN A+ WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

A0A5D3BB91 Reverse transcriptase1.6e-3585.87Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        EEQLLDRLAQRLVSGIRSAQSD EKK+G ERLKALG  TFAGTTNP D EAWL LIEKCFRV R LEDRKVELAAFLLQN A+ WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

A0A5D3C1T8 Uncharacterized protein3.2e-3690.59Show/hide
Query:  LAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR
        L +  +  IRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEE R
Subjt:  LAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR

A0A5D3DES5 DNA/RNA polymerases superfamily protein4.6e-3582.29Show/hide
Query:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNG----AKYWWRMEESR
        EEQLLDRLAQRL+SGIRSAQSD EKK+GIERLKALG  TF GTTNPADAEAWL LIEKCFRV RC EDRKVELA+FLLQNG     + WWRMEESR
Subjt:  EEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNG----AKYWWRMEESR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGAAGAGCAATTGCTTGATAGATTGGCTCAAAGATTGGTGTCAGGGATTAGATCGGCACAATCAGACCTAGAAAAGAAGTTTGGGATTGAGCGATTGAAAGC
CTTGGGTGTTGCCACTTTCGCGGGGACAACAAATCCCGCCGATGCTGAAGCATGGCTTAATTTGATTGAAAAATGCTTTAGAGTAATGAGATGTCTGGAGGATAGAAAGG
TGGAACTTGCTGCCTTTTTACTCCAAAATGGTGCTAAATATTGGTGGCGCATGGAAGAAAGTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGGAAGAGCAATTGCTTGATAGATTGGCTCAAAGATTGGTGTCAGGGATTAGATCGGCACAATCAGACCTAGAAAAGAAGTTTGGGATTGAGCGATTGAAAGC
CTTGGGTGTTGCCACTTTCGCGGGGACAACAAATCCCGCCGATGCTGAAGCATGGCTTAATTTGATTGAAAAATGCTTTAGAGTAATGAGATGTCTGGAGGATAGAAAGG
TGGAACTTGCTGCCTTTTTACTCCAAAATGGTGCTAAATATTGGTGGCGCATGGAAGAAAGTAGATGA
Protein sequenceShow/hide protein sequence
MLREEQLLDRLAQRLVSGIRSAQSDLEKKFGIERLKALGVATFAGTTNPADAEAWLNLIEKCFRVMRCLEDRKVELAAFLLQNGAKYWWRMEESR