; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020552 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020552
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:6610743..6610979
RNA-Seq ExpressionIVF0020552
SyntenyIVF0020552
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025975.1 uncharacterized protein E6C27_scaffold34G002910 [Cucumis melo var. makuwa]7.80e-1968.33Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAM
        M +IEYEK F ELAKY L FV DEVDKCK+F EG+R EIRAP+TA+++WS+ SK+V VAM
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAM

KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.07e-40100Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVL
        MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVL
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVL

KAA0062038.1 hypothetical protein E6C27_scaffold89G003760 [Cucumis melo var. makuwa]3.36e-2165.28Show/hide
Query:  YEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        YEK+F ELAKYAL FV DE DKCKRFEEG++TEI A VT +MD  + SK+V+ AMRVE+ M  DKKNK+ K+
Subjt:  YEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.09e-2666.23Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        M + EYEK F ELAKYAL FV +E DKCKRFEEG+RTEIRA +T +MDWS+ SK+V+V M VEK MV+DKKN   K+
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

TYK04983.1 uncharacterized protein E5676_scaffold143G002070 [Cucumis melo var. makuwa]1.22e-2065.28Show/hide
Query:  YEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        YEK+F ELAKYAL FV DE DKCKRFEEG++TEI A VT +MD  + SK+V+ AMRVE+ M  DKKNK+ K+
Subjt:  YEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

TrEMBL top hitse value%identityAlignment
A0A5A7SND8 Retrotrans_gag domain-containing protein4.8e-1468.33Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAM
        M +IEYEK F ELAKY L FV DEVDKCK+F EG+R EIRAP+TA+++WS+ SK+V VAM
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAM

A0A5A7V373 Uncharacterized protein2.0e-1561.04Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        + +  YEK+F ELAKYAL FV DE DKCKRFEEG++TEI A VT +MD  + SK+V+ AMRVE+ M  DKKNK+ K+
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

A0A5A7V3F2 Zf-CCHC domain-containing protein5.0e-1966.23Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        M + EYEK F ELAKYAL FV +E DKCKRFEEG+RTEIRA +T +MDWS+ SK+V+V M VEK MV+DKKN   K+
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

A0A5D3BZ05 Retrotrans_gag domain-containing protein2.0e-1561.04Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        + +  YEK+F ELAKYAL FV DE DKCKRFEEG++TEI A VT +MD  + SK+V+ AMRVE+ M  DKKNK+ K+
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

A0A5D3D2P1 Putative Retrotransposon protein5.1e-3297.4Show/hide
Query:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR
        MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVL +
Subjt:  MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCATAGAGTATGAGAAAAGATTTATCGAGTTGGCTAAGTACGCCTTAGTTTTCGTAACCGATGAGGTAGACAAGTGCAAGCGATTTGAAGAAGGCATGAGGAC
CGAAATTAGGGCACCAGTCACTGCCAACATGGATTGGTCTAACTTGTCTAAGATGGTCAAAGTTGCCATGAGGGTTGAAAAACGCATGGTAGATGACAAGAAAAATAAGG
TTTTGAAAAGGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCATAGAGTATGAGAAAAGATTTATCGAGTTGGCTAAGTACGCCTTAGTTTTCGTAACCGATGAGGTAGACAAGTGCAAGCGATTTGAAGAAGGCATGAGGAC
CGAAATTAGGGCACCAGTCACTGCCAACATGGATTGGTCTAACTTGTCTAAGATGGTCAAAGTTGCCATGAGGGTTGAAAAACGCATGGTAGATGACAAGAAAAATAAGG
TTTTGAAAAGGGCCTAG
Protein sequenceShow/hide protein sequence
MAIIEYEKRFIELAKYALVFVTDEVDKCKRFEEGMRTEIRAPVTANMDWSNLSKMVKVAMRVEKRMVDDKKNKVLKRA