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IVF0020583 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020583
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr04:21887590..21887865
RNA-Seq ExpressionIVF0020583
SyntenyIVF0020583
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]7.70e-2362.67Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDL
        M +A +EWRTLV CQKPLEMHLQ+RK AELE F  LSQEN S+ + + VF    +K SP+GFFPL  +GHK FDL
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDL

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]4.92e-2756.86Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGF---------------RCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNP
        + NA  EWRTLV CQKPL+MHLQ+RK AELE F               RC S ENAS+ + DSVF     K+  D FFPLL +GH+ FDLR SYSEDFNP
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGF---------------RCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNP

Query:  HS
        HS
Subjt:  HS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]2.39e-3367.78Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHA
        MANA +EW+TLV CQKPLEM+LQRRK  EL+ F C SQENASD +PDS F    +KRSP GFF LL +GHK FDL+ SY EDFN HSWH+
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]9.58e-2668.57Show/hide
Query:  LQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHAP
        ++RR  A+L+ FRC SQENAS+   DSVF   C+K +PDGFFPLL +GHK FDLR SYSEDFNPHSWHAP
Subjt:  LQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHAP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.48e-2671.83Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHK
        MANA +EWR LV CQKPLEMHLQRRK  ELE FRC SQEN S+ +PDS F    +KRSPDGFFPLL +GHK
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHK

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein2.6e-2767.78Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHA
        MANA +EW+TLV CQKPLEM+LQRRK  EL+ F C SQENASD +PDS F    +KRSP GFF LL +GHK FDL+ SY EDFN HSWH+
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein8.1e-2168.57Show/hide
Query:  LQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHAP
        ++RR  A+L+ FRC SQENAS+   DSVF   C+K +PDGFFPLL +GHK FDLR SYSEDFNPHSWHAP
Subjt:  LQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHAP

A0A5D3CGX3 Uncharacterized protein2.8e-2156.86Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEG---------------FRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNP
        + NA  EWRTLV CQKPL+MHLQ+RK AELE                FRC S ENAS+ + DSVF     K+  D FFPLL +GH+ FDLR SYSEDFNP
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEG---------------FRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNP

Query:  HS
        HS
Subjt:  HS

A0A5D3DFP2 Uncharacterized protein2.8e-2171.83Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHK
        MANA +EWR LV CQKPLEMHLQRRK  ELE FRC SQEN S+ +PDS F    +KRSPDGFFPLL +GHK
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHK

A0A5D3E5W4 NBS-LRR type resistance protein8.4e-1862.67Show/hide
Query:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDL
        M +A +EWRTLV CQKPLEMHLQ+RK AELE F  LSQEN S+ + + VF    +K SP+GFFPL  +GHK FDL
Subjt:  MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTTCGACGAGTGGCGAACGCTCGTTGGGTGTCAGAAACCATTGGAAATGCATTTGCAGCGAAGGAAAGGGGCTGAGCTAGAGGGCTTCCGGTGTTTGTC
CCAAGAAAATGCGAGCGACAAGTCTCCCGACTCAGTTTTCTTGTTCGGGTGTAGAAAGCGATCGCCCGACGGTTTCTTCCCTTTGCTTCATGTTGGCCATAAGCCTTTCG
ATCTTCGTAGCTCATACTCCGAGGATTTCAATCCACACTCATGGCATGCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTTCGACGAGTGGCGAACGCTCGTTGGGTGTCAGAAACCATTGGAAATGCATTTGCAGCGAAGGAAAGGGGCTGAGCTAGAGGGCTTCCGGTGTTTGTC
CCAAGAAAATGCGAGCGACAAGTCTCCCGACTCAGTTTTCTTGTTCGGGTGTAGAAAGCGATCGCCCGACGGTTTCTTCCCTTTGCTTCATGTTGGCCATAAGCCTTTCG
ATCTTCGTAGCTCATACTCCGAGGATTTCAATCCACACTCATGGCATGCTCCCTGA
Protein sequenceShow/hide protein sequence
MANAFDEWRTLVGCQKPLEMHLQRRKGAELEGFRCLSQENASDKSPDSVFLFGCRKRSPDGFFPLLHVGHKPFDLRSSYSEDFNPHSWHAP