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IVF0020608 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020608
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr06:933187..933558
RNA-Seq ExpressionIVF0020608
SyntenyIVF0020608
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.46e-5078.05Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        +VTRSRSRL  IWIGS TESSTP RPS NLIRPSG VIQMR  ASPSSN ESSTPP TTYSQAVT DKRFVPRPE K+YF+KSI VY P IE EYQ+LTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EE  VSKIFPK FNFLPE    K
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]3.11e-4977.97Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        +VTRSRSRL GI IG  TESSTP RPSANLIRP G V+QM+  ASPSSN +SSTPP TTYSQAVTPDKRFVPRP+ K YF+KSI VY PTIELEYQ+LTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPE
        EE+ VSKIFP+ FNFLPE
Subjt:  EESTVSKIFPKGFNFLPE

KAA0033734.1 hypothetical protein E6C27_scaffold239G002090 [Cucumis melo var. makuwa]2.38e-79100Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EESTVSKIFPKGFNFLPEKTSTK
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.57e-4377.78Show/hide
Query:  VTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLE
        VTR  SR FGIWIGS TESSTP RPS NLIRPS  V+QMR  ASPSSN ESSTPP TTYSQAVTPDKRFVPRPE K+YF+K I VY P IELEYQ+LT E
Subjt:  VTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLE

Query:  ESTVSKIFPKGFNFLPE
        E TVSKIFP+ FNFL E
Subjt:  ESTVSKIFPKGFNFLPE

TYK23025.1 hypothetical protein E5676_scaffold386G001370 [Cucumis melo var. makuwa]2.38e-79100Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EESTVSKIFPKGFNFLPEKTSTK
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

TrEMBL top hitse value%identityAlignment
A0A5A7SRB3 Uncharacterized protein3.1e-60100Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EESTVSKIFPKGFNFLPEKTSTK
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

A0A5A7TM80 Putative Retrotransposon protein2.4e-3677.78Show/hide
Query:  VTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLE
        VTR  SR FGIWIGS TESSTP RPS NLIRPS  V+QMR  ASPSSN ESST PPTTYSQAVTPDKRFVPRPE K+YF+K I VY P IELEYQ+LT E
Subjt:  VTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLE

Query:  ESTVSKIFPKGFNFLPE
        E TVSKIFP+ FNFL E
Subjt:  ESTVSKIFPKGFNFLPE

A0A5D3DHH1 Uncharacterized protein3.1e-60100Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EESTVSKIFPKGFNFLPEKTSTK
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

A0A5D3E4J4 Uncharacterized protein1.7e-3777.97Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        +VTRSRSRL GI IG  TESSTP RPSANLIRP G V+QM+  ASPSSN +SST PPTTYSQAVTPDKRFVPRP+ K YF+KSI VY PTIELEYQ+LTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPE
        EE+ VSKIFP+ FNFLPE
Subjt:  EESTVSKIFPKGFNFLPE

E5GCE6 Uncharacterized protein2.6e-3878.05Show/hide
Query:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL
        +VTRSRSRL  IWIGS TESSTP RPS NLIRPSG VIQMR  ASPSSN ESST PPTTYSQAVT DKRFVPRPE K+YF+KSI VY P IE EYQ+LTL
Subjt:  MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTL

Query:  EESTVSKIFPKGFNFLPEKTSTK
        EE  VSKIFPK FNFLPE    K
Subjt:  EESTVSKIFPKGFNFLPEKTSTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACCCGATCTAGATCAAGATTGTTTGGCATATGGATTGGATCTCTCACGGAGTCATCAACTCCACTTAGGCCTTCGGCCAATCTCATTCGTCCTTCTGGCGAAGT
CATTCAAATGAGGTCTCTTGCCTCTCCTTCATCCAATATGGAGTCTTCTACTCCTCCTCCTACAACTTATTCACAGGCTGTCACTCCCGATAAACGATTCGTACCCAGAC
CCGAGTTCAAAACTTACTTTAAAAAATCAATTGAGGTCTACTATCCTACCATAGAACTCGAATATCAAAATCTTACTTTAGAAGAGAGTACAGTTTCAAAAATCTTTCCT
AAGGGCTTCAATTTCCTTCCAGAGAAAACCTCAACAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACCCGATCTAGATCAAGATTGTTTGGCATATGGATTGGATCTCTCACGGAGTCATCAACTCCACTTAGGCCTTCGGCCAATCTCATTCGTCCTTCTGGCGAAGT
CATTCAAATGAGGTCTCTTGCCTCTCCTTCATCCAATATGGAGTCTTCTACTCCTCCTCCTACAACTTATTCACAGGCTGTCACTCCCGATAAACGATTCGTACCCAGAC
CCGAGTTCAAAACTTACTTTAAAAAATCAATTGAGGTCTACTATCCTACCATAGAACTCGAATATCAAAATCTTACTTTAGAAGAGAGTACAGTTTCAAAAATCTTTCCT
AAGGGCTTCAATTTCCTTCCAGAGAAAACCTCAACAAAATAA
Protein sequenceShow/hide protein sequence
MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLEESTVSKIFP
KGFNFLPEKTSTK