; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020620 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020620
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationchr12:337644..341417
RNA-Seq ExpressionIVF0020620
SyntenyIVF0020620
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142382.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus]1.65e-8595.45Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YV+GREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]1.26e-89100Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

XP_022957489.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata]2.34e-8594.7Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQD G+KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]1.41e-8695.45Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTT+SQ+RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQD G+KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]1.21e-8797.73Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQD GAKDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein3.5e-6595.45Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YV+GREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.6e-68100Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.0e-6188.64Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV T+SQLRS++AS+IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVG EGLVQD G KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.6e-6594.7Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQD G+KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.8e-6593.94Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT+S +RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        YVVGREGLVQD G+KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.9e-0836.36Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.6e-0935.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.9e-0836.36Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.6e-0938.64Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.8e-4971.54Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGMSNFLKNFYRSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein7.0e-5071.54Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGMSNFLKNFYRSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGMSNFLKNFYRSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGC
AATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAA
GATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTTAAAGAAAATTTTAATTTACTTTGTGTCTGTTTGGTGGAGATATCTAAGGGTGGTGGAGAAATAGAACTGGGAGAAGGAAAGTAGGGATTTGAAGATTGTGAG
AGGCAGCGCAGCGATAGCCGAGCGGAGTTGGCGAAGGCAGAGCGAAGAAAAACTCGGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTC
TTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTC
CGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCA
TGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCT
ACAGAAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGATATCCATAGTTTTAATTTGTGATCTTGAGTAATAATGAAGGAACTATACCTGT
CCTCTAGACCATGACATTATTTGATCGTTTTGTGGGATTGAATTGTTGGTATATTATAACCAAAGCAATCCAAGATCTTTGTTTCTATTTACTCGGTTCGTTAACTATTA
AGCCTAAATGTGGTGTCTACTCTATGCTTTGGTTCCAGATGGTGCTTTCCTCGGTTTCGATTGGCTTCATTCATCACTGCCATTTGTATAAGTTCTATACATTATATAAC
TTGAAAAGGGACTGTGGTCTCTATTTATA
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQ
DFGAKDQGMSNFLKNFYRSNYF