CuGenDBv2

Gene ID	IVF0020628
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Genome location	chr08:17903697..17909104
RNA-Seq Expression	IVF0020628
Synteny	IVF0020628
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004518 - nuclease activity (molecular function) GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0

67.92

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Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVTGWTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA---------------PDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA                DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA---------------PDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRK           APLHRDLERAEIAVSVGAVT QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
                                          DF                      KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDAR
Subjt:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHL
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD      +      AP                ES V ++           +  ++  R  P F +
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHL

Query:  LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGY-------------------
          VDPLSVDSIEGHNRVSG                          N  ASCSLCAI  K LFADR RC   +Y+VV+ +                     
Subjt:  LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGY-------------------

Query:  ----VVD---WN--------------------------------------------------------CMLMDFTNL--KVRVQRGADRREAGRMREGHM
            VVD   W                                                         C     T L  +VR QRGADRREAGR REGHM
Subjt:  ----VVD---WN--------------------------------------------------------CMLMDFTNL--KVRVQRGADRREAGRMREGHM

Query:  DASGLPI
        DASG  I
Subjt:  DASGLPI

KAA0036666.1 pol protein [Cucumis melo var. makuwa]

0.0

72.45

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Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KN+YPLP ID+LFDQL GATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIY KTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK VSFLGH+VSKAGVSVDPAKIEAVTG TR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           +PLHRDLERAEIAVSVGAVTIQLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  -----------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF
                   DF                      KSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIV DRDARFTSKFWKGLQTAMGTRLDFSTAF
Subjt:  -----------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF

Query:  HPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQ
        HPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGE+   R      +   + A   +  R+   +
Subjt:  HPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQ

Query:  SRQKSYADVRRKDPSRAEPNTSKPSRAPCS---PSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGK
            S+       P++ E     PS A  +     HLSLPSSTSGHGESS+RIVFDEFPNV+TSDS+LNIGIR GPTFH LKVDPLSVDSIEGHNRVSGK
Subjt:  SRQKSYADVRRKDPSRAEPNTSKPSRAPCS---PSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGK

Query:  GFPTTGPRIEARNVV--------IHRGLRVSNC---NVTASCSL-CA-----------IGSKMLFAD--------------RHRCPD--VLYIVVMSMGY
        GFPTTGP+IEA NVV        +  G+R  NC        CS+ C+           +G++++ A               R  C    +  ++ +S G 
Subjt:  GFPTTGPRIEARNVV--------IHRGLRVSNC---NVTASCSL-CA-----------IGSKMLFAD--------------RHRCPD--VLYIVVMSMGY

Query:  VVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDAS
        +    C     T L  +VRVQRGADRREAGRMREGHMDAS
Subjt:  VVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDAS

KAA0040689.1 pol protein [Cucumis melo var. makuwa]

0.0

62.07

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Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDP KIEAVTGWTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           APLHRDLERAEIAVSVGAVT+QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP-----------------------DF--
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHP                       +F  
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP-----------------------DF--

Query:  ------------------------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
                                            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Subjt:  ------------------------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA

Query:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA
        FHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV+STNEAIQKIRSRMHTA
Subjt:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA

Query:  QSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGKGF
        QSRQKSYADVRRKD                                    + F+                                              
Subjt:  QSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGKGF

Query:  PTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGYVVDWNCMLMDFTNLKVRVQRGADRREAGRMREGHMDASGLP
                                         +G K+                                  LKV   RG  R E    R G +      
Subjt:  PTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGYVVDWNCMLMDFTNLKVRVQRGADRREAGRMREGHMDASGLP

Query:  ITLKGCTVIWVVVDRLMKSAHFILGKSTYTASKWAKLYLIEIRDCIG-CQYRLFLIMMPVSLPSSRRDFRLPWARATIGMAPFEALYGKCCRFPVCWDEV
                          S  F+ G               EI + IG   YRL L   P SL                                      
Subjt:  ITLKGCTVIWVVVDRLMKSAHFILGKSTYTASKWAKLYLIEIRDCIG-CQYRLFLIMMPVSLPSSRRDFRLPWARATIGMAPFEALYGKCCRFPVCWDEV

Query:  GEQRLMGLQLVQSTNETIHKIRERIQAAQSRQKRYADVRQKDLEFDVGDKVFLKVAPMKDPSHVVDYEPLEIDENLSYAEQPVEILAREAKILRNREIAL
                        T+H +                       F V   +  K  P  DPSHVVDYEPLEIDENLSY EQPVE+LARE K LRN+EI +
Subjt:  GEQRLMGLQLVQSTNETIHKIRERIQAAQSRQKRYADVRQKDLEFDVGDKVFLKVAPMKDPSHVVDYEPLEIDENLSYAEQPVEILAREAKILRNREIAL

Query:  VKVLWRNHKVKEATWEREDDIRACYPELFED
        VKVLWRNH+V EATWEREDD+R+ YPELFE+
Subjt:  VKVLWRNHKVKEATWEREDDIRACYPELFED

KAA0043555.1 pol protein [Cucumis melo var. makuwa]

0.0

74.15

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Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYA FSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVT WTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLY EKIQIFTDHKSLKYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           APLHRDLE+AEI VSVG VT+QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQ NDPYLVEK GLAEAGQAV FSISSDGGLLFERRLCVPS SAVKTELLSEAHSSP SMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
        DF                      KSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Subjt:  DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL

Query:  NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRR
        NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIR RM TAQSRQKSYADVRR
Subjt:  NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRR

Query:  KD--------------PSRAEPNTSKPSRAPCSPS----------------HLSLPSSTS---------------------------------GHGESSV
        +D              P +      K  R   SP                  L+LP S S                                  + E  V
Subjt:  KD--------------PSRAEPNTSKPSRAPCSPS----------------HLSLPSSTS---------------------------------GHGESSV

Query:  RIVFDE---FPNVSTSDSSLNIGIRVGPTFHL-----LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFA
         ++  E   + +    +  L +   V    HL      +VD LSVDSIEGHN+VSGKGFPTTGP IEARNVVIHRGL VSN  VTASCSLCAIG K LF 
Subjt:  RIVFDE---FPNVSTSDSSLNIGIRVGPTFHL-----LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFA

Query:  DRHRCPDVLYIVV
        DRHRCPDVL +VV
Subjt:  DRHRCPDVLYIVV

KAA0046049.1 pol protein [Cucumis melo var. makuwa]

0.0

61.95

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Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KN YPL  ID+LFD+LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV+SFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVT WTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           APLHRDLERAEI VSVGAVT+QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLC+PSDSAVKT+LLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
                                          DF                      KSAHFVPGKST TASKW QLYMSEIVRLHGV VSIVSDRDAR
Subjt:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRAEPNTSK----------------------------PSRAPC------
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD              P R      K                            PS +        
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRAEPNTSK----------------------------PSRAPC------

Query:  --------SPSH---------------------------------------------------------------LSLPSSTSGHGESSVRIVFDEF---
                 PSH                                                               LS PSSTS    S  R  F  F   
Subjt:  --------SPSH---------------------------------------------------------------LSLPSSTSGHGESSVRIVFDEF---

Query:  ---PNVSTSDSS----------------LNIGIRVGPTFHLLK------------------------------------------------VDPLSVDSI
           P+     SS                L   +R GP   L+                                                 VD LSV+SI
Subjt:  ---PNVSTSDSS----------------LNIGIRVGPTFHLLK------------------------------------------------VDPLSVDSI

Query:  EGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCP-------DVLYIVVMSMGYVVDWN-------------CMLMD
        EGHN+VSGKGFPTTGPRIEA NVVIHRGL VSN  VTASCSLCAIG K LF DRHRC         V    +  + Y+ D               C  + 
Subjt:  EGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCP-------DVLYIVVMSMGYVVDWN-------------CMLMD

Query:  FTNL----------------------KVRVQRGADRREAGRMREGHMDASG
         T L                      +VRVQRGADRREAGRMREGHMDASG
Subjt:  FTNL----------------------KVRVQRGADRREAGRMREGHMDASG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

67.92

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVTGWTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA---------------PDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA                DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA---------------PDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRK           APLHRDLERAEIAVSVGAVT QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
                                          DF                      KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDAR
Subjt:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHL
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD      +      AP                ES V ++           +  ++  R  P F +
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHL

Query:  LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGY-------------------
          VDPLSVDSIEGHNRVSG                          N  ASCSLCAI  K LFADR RC   +Y+VV+ +                     
Subjt:  LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSMGY-------------------

Query:  ----VVD---WN--------------------------------------------------------CMLMDFTNL--KVRVQRGADRREAGRMREGHM
            VVD   W                                                         C     T L  +VR QRGADRREAGR REGHM
Subjt:  ----VVD---WN--------------------------------------------------------CMLMDFTNL--KVRVQRGADRREAGRMREGHM

Query:  DASGLPI
        DASG  I
Subjt:  DASGLPI

A0A5A7T0M7 Reverse transcriptase

0.0e+00

66.32

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF SRYGHYEFIVMSFGLTNAP VF+DLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEH EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVTGW R STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHK LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRK           APLH+DLERAEIAVSVGAVTIQLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDF------------------KSAHFVP
        VQP+LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL VPSDS VKTELLSEAHSSPFSMHP                    KSAHF+P
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDF------------------KSAHFVP

Query:  GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        GKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQT MGTRLDFSTAFHPQTD Q ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

Query:  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRA----------E
        NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD              P R            
Subjt:  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRA----------E

Query:  PNTSKP-----------SRAPCSPS--------HLSL-----------------------------------------------------PSSTSGHGES
        P+  +P            R    PS        H+S+                                                      SS+  H  +
Subjt:  PNTSKP-----------SRAPCSPS--------HLSL-----------------------------------------------------PSSTSGHGES

Query:  SVRIVFDEFPNV-----------------------------------STSDSSLNI-----------------GIRVGPTFHL-----LKVDPLSVDSIE
         VR+    F  V                                   S SDS+  +                    V    HL      +VD LSVDSIE
Subjt:  SVRIVFDEFPNV-----------------------------------STSDSSLNI-----------------GIRVGPTFHL-----LKVDPLSVDSIE

Query:  GHNRVSGKGFPTTGPRIEARNVV-------IHRGLRVSNC---NVTASCS--------------------LCAI--GSKMLFAD----RHRCPD--VLYI
         HN+VSGKGFPTTGPRIEARNV        +  G+R  NC      A CS                    +CA    ++++ A     R  C    +  +
Subjt:  GHNRVSGKGFPTTGPRIEARNVV-------IHRGLRVSNC---NVTASCS--------------------LCAI--GSKMLFAD----RHRCPD--VLYI

Query:  VVMSMGYVVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDASG
        + +S G +    C     T L  +VRVQRGADRREAGRMREGHMDASG
Subjt:  VVMSMGYVVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDASG

A0A5A7T3J6 Reverse transcriptase

0.0e+00

72.66

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KN+YPLP ID+LFDQL GATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIY KTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK VSFLGH+VSKAGVSVDPAKIEAVTG TR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIF DHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           +PLHRDLERAEIAVSVGAVTIQLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  -----------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF
                   DF                      KSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIV DRDARFTSKFWKGLQTAMGTRLDFSTAF
Subjt:  -----------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF

Query:  HPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQ
        HPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGE+   R      +   + A   +  R+   +
Subjt:  HPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQ

Query:  SRQKSYADVRRKDPSRAEPNTSKPSRAPCS---PSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGK
            S+       P++ E     PS A  +     HLSLPSSTSGHGESS+RIVFDEFPNV+TSDS+LNIGIR GPTFH LKVDPLSVDSIEGHNRVSGK
Subjt:  SRQKSYADVRRKDPSRAEPNTSKPSRAPCS---PSHLSLPSSTSGHGESSVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGK

Query:  GFPTTGPRIEARNVV--------IHRGLRVSNC---NVTASCS--------------------LCA-IGSKMLF-----ADRHRCPD--VLYIVVMSMGY
        GFPTTGP+IEA NVV        +  G+R  NC        CS                    +CA  GS  L      + R  C    +  ++ +S G 
Subjt:  GFPTTGPRIEARNVV--------IHRGLRVSNC---NVTASCS--------------------LCA-IGSKMLF-----ADRHRCPD--VLYIVVMSMGY

Query:  VVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDAS
        +    C     T L  +VRVQRGADRREAGRMREGHMDAS
Subjt:  VVDWNCMLMDFTNL--KVRVQRGADRREAGRMREGHMDAS

A0A5A7TQ69 Reverse transcriptase

0.0e+00

74.15

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KNRYPLP ID+LFDQLQGATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYA FSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVT WTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLY EKIQIFTDHKSLKYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           APLHRDLE+AEI VSVG VT+QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQ NDPYLVEK GLAEAGQAV FSISSDGGLLFERRLCVPS SAVKTELLSEAHSSP SMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
        DF                      KSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Subjt:  DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL

Query:  NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRR
        NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIR RM TAQSRQKSYADVRR
Subjt:  NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRR

Query:  KD--------------PSRAEPNTSKPSRAPCSPS----------------HLSLPSSTS---------------------------------GHGESSV
        +D              P +      K  R   SP                  L+LP S S                                  + E  V
Subjt:  KD--------------PSRAEPNTSKPSRAPCSPS----------------HLSLPSSTS---------------------------------GHGESSV

Query:  RIVFDE---FPNVSTSDSSLNIGIRVGPTFHL-----LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFA
         ++  E   + +    +  L +   V    HL      +VD LSVDSIEGHN+VSGKGFPTTGP IEARNVVIHRGL VS  NVTASCSLCAIG K LF 
Subjt:  RIVFDE---FPNVSTSDSSLNIGIRVGPTFHL-----LKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFA

Query:  DRHRCPDVLYIVV
        DRHRCPDVL +VV
Subjt:  DRHRCPDVLYIVV

A0A5A7TXS2 Reverse transcriptase

0.0e+00

61.95

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVT+KN YPL  ID+LFD+LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV+SFGLTNAP VFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGH+VSKAGVSVDPAKIEAVT WTR STVSE+RSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAP               DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK           APLHRDLERAEI VSVGAVT+QLAQLT
Subjt:  GHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK-----------APLHRDLERAEIAVSVGAVTIQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLC+PSDSAVKT+LLSEAHSSPFSMHP                           
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP---------------------------

Query:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
                                          DF                      KSAHFVPGKST TASKW QLYMSEIVRLHGV VSIVSDRDAR
Subjt:  ----------------------------------DF----------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRAEPNTSK----------------------------PSRAPC------
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD              P R      K                            PS +        
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKD--------------PSRAEPNTSK----------------------------PSRAPC------

Query:  --------SPSH---------------------------------------------------------------LSLPSSTSGHGESSVRIVFDEF---
                 PSH                                                               LS PSSTS    S  R  F  F   
Subjt:  --------SPSH---------------------------------------------------------------LSLPSSTSGHGESSVRIVFDEF---

Query:  ---PNVSTSDSS----------------LNIGIRVGPTFHLLK------------------------------------------------VDPLSVDSI
           P+     SS                L   +R GP   L+                                                 VD LSV+SI
Subjt:  ---PNVSTSDSS----------------LNIGIRVGPTFHLLK------------------------------------------------VDPLSVDSI

Query:  EGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCP-------DVLYIVVMSMGYVVDWN-------------CMLMD
        EGHN+VSGKGFPTTGPRIEA NVVIHRGL VS  NVTASCSLCAIG K LF DRHRC         V    +  + Y+ D               C  + 
Subjt:  EGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCP-------DVLYIVVMSMGYVVDWN-------------CMLMD

Query:  FTNL----------------------KVRVQRGADRREAGRMREGHMDASG
         T L                      +VRVQRGADRREAGRMREGHMDASG
Subjt:  FTNL----------------------KVRVQRGADRREAGRMREGHMDASG

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

6.5e-87

28.69

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +     E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ P               DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      P+ +D E   I          + Q
Subjt:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ

Query:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------
        +++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HP                       
Subjt:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------

Query:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR
                                              DF                     K A  VP   + TA + A+++   ++   G P  I++D 
Subjt:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR

Query:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE
        D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+  
Subjt:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE

Query:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP
              E  Q T +  Q ++  ++T   + K Y D++ ++    +P
Subjt:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP

P0CT35 Transposon Tf2-2 polyprotein

6.5e-87

28.69

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +     E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ P               DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      P+ +D E   I          + Q
Subjt:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ

Query:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------
        +++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HP                       
Subjt:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------

Query:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR
                                              DF                     K A  VP   + TA + A+++   ++   G P  I++D 
Subjt:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR

Query:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE
        D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+  
Subjt:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE

Query:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP
              E  Q T +  Q ++  ++T   + K Y D++ ++    +P
Subjt:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP

P0CT36 Transposon Tf2-3 polyprotein

6.5e-87

28.69

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +     E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ P               DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      P+ +D E   I          + Q
Subjt:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ

Query:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------
        +++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HP                       
Subjt:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------

Query:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR
                                              DF                     K A  VP   + TA + A+++   ++   G P  I++D 
Subjt:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR

Query:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE
        D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+  
Subjt:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE

Query:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP
              E  Q T +  Q ++  ++T   + K Y D++ ++    +P
Subjt:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP

P0CT37 Transposon Tf2-4 polyprotein

6.5e-87

28.69

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +     E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ P               DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      P+ +D E   I          + Q
Subjt:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ

Query:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------
        +++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HP                       
Subjt:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------

Query:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR
                                              DF                     K A  VP   + TA + A+++   ++   G P  I++D 
Subjt:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR

Query:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE
        D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+  
Subjt:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE

Query:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP
              E  Q T +  Q ++  ++T   + K Y D++ ++    +P
Subjt:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP

P0CT41 Transposon Tf2-12 polyprotein

6.5e-87

28.69

Show/hide

Query:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +     E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ P               DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP---------------DASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      P+ +D E   I          + Q
Subjt:  ALKIWGHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR----KAPLHRDLERAEIAVSVGAVTIQLAQ

Query:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------
        +++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HP                       
Subjt:  LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHP-----------------------

Query:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR
                                              DF                     K A  VP   + TA + A+++   ++   G P  I++D 
Subjt:  --------------------------------------DF---------------------KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDR

Query:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE
        D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+  
Subjt:  DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGE

Query:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP
              E  Q T +  Q ++  ++T   + K Y D++ ++    +P
Subjt:  QRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.2e-22

43.7

Show/hide

Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW      +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAP
        ++    +F+ LK  + T P
Subjt:  SKACEDSFQNLKQKLVTAP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCATTAAGAACAGATATCCCTTGCCTTGGATCGACAATCTATTTGACCAGTTACAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGAATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGACAGTGTTTATGGACTTGATGAACCGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTGGGCCACATGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACTTTCCACAGTCAGTGAGATTCGTAGCT
TTCTGGGTTTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCA
TGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGC
TTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGGGGCATTACTTATATGGTGAAAAGA
TACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATA
CTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCAC
TATACAGTTAGCCCAATTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGC
AAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCAGAGGCTCACAGT
TCCCCATTTTCCATGCACCCAGACTTCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTATACATGTCTGAGATAGTGAGATT
ACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTT
TCCATCCACAGACTGACGGTCAGACTGAGCGCCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTG
ATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCGCCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGTTGGGGTGAGGTGGGTGA
GCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACTGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGA
GGCGGAAGGATCCAAGCCGAGCCGAGCCGAACACCTCCAAGCCAAGCCGAGCTCCCTGTTCACCGAGCCACCTAAGCCTTCCTTCCTCCACTTCGGGTCATGGTGAGTCT
TCGGTAAGGATTGTTTTTGATGAATTTCCTAATGTTTCTACATCCGATTCGAGTTTGAATATTGGAATAAGAGTTGGTCCTACCTTTCATCTCTTGAAGGTGGATCCGTT
GAGCGTGGACTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTAGAAACGTAGTAATCCACAGGGGATTACGCGTTA
GTAACTGTAACGTGACCGCTAGTTGTAGCTTGTGTGCCATCGGGAGTAAGATGTTGTTTGCGGATAGACACCGATGTCCGGATGTTCTGTATATTGTAGTTATGTCAATG
GGCTACGTTGTGGACTGGAATTGTATGTTGATGGACTTTACAAATCTTAAGGTAAGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATAT
GGACGCGTCTGGATTACCTATAACCCTAAAGGGTTGCACTGTGATTTGGGTTGTTGTTGATAGGCTTATGAAATCAGCACACTTCATCCTAGGAAAATCCACTTATACTG
CTAGTAAGTGGGCAAAGTTATACTTGATTGAGATTAGAGACTGCATAGGGTGCCAGTATCGATTATTTCTAATAATGATGCCTGTTTCACTTCCAAGTTCTAGAAGGGAC
TTTAGGCTGCCATGGGCACGAGCTACCATTGGCATGGCACCATTTGAGGCTCTGTACGGAAAATGTTGCAGATTCCCTGTTTGTTGGGATGAGGTTGGTGAACAGAGATT
GATGGGTCTTCAGTTAGTACAGTCTACTAATGAGACAATACATAAAATTAGAGAACGTATACAAGCAGCTCAGAGTAGACAAAAACGTTATGCTGATGTGAGACAAAAAG
ATCTTGAGTTTGATGTGGGAGATAAAGTGTTCTTGAAAGTAGCACCTATGAAAGATCCATCTCATGTGGTGGATTACGAGCCACTGGAAATTGATGAGAATTTGAGTTAT
GCAGAACAACCAGTTGAGATTCTTGCTAGAGAAGCAAAGATCCTGCGTAACAGAGAAATTGCTTTAGTCAAAGTTTTATGGCGAAATCACAAAGTTAAAGAGGCTACGTG
GGAAAGAGAAGATGACATAAGAGCTTGTTACCCAGAGTTGTTCGAGGATTAG

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTIKNRYPLPWIDNLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRLSTVSEIRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
CEDSFQNLKQKLVTAPDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWGHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
LYHPGKANVVADALSRKAPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHS
SPFSMHPDFKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHL
MEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDPSRAEPNTSKPSRAPCSPSHLSLPSSTSGHGES
SVRIVFDEFPNVSTSDSSLNIGIRVGPTFHLLKVDPLSVDSIEGHNRVSGKGFPTTGPRIEARNVVIHRGLRVSNCNVTASCSLCAIGSKMLFADRHRCPDVLYIVVMSM
GYVVDWNCMLMDFTNLKVRVQRGADRREAGRMREGHMDASGLPITLKGCTVIWVVVDRLMKSAHFILGKSTYTASKWAKLYLIEIRDCIGCQYRLFLIMMPVSLPSSRRD
FRLPWARATIGMAPFEALYGKCCRFPVCWDEVGEQRLMGLQLVQSTNETIHKIRERIQAAQSRQKRYADVRQKDLEFDVGDKVFLKVAPMKDPSHVVDYEPLEIDENLSY
AEQPVEILAREAKILRNREIALVKVLWRNHKVKEATWEREDDIRACYPELFED

IVF0020628 (gene) of Melon (IVF77) v1 genome