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IVF0020669 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020669
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger CCCH-type with G patch domain-containing protein
Genome locationchr02:12377584..12377959
RNA-Seq ExpressionIVF0020669
SyntenyIVF0020669
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050034.1 Zinc finger CCCH-type with G patch domain-containing protein [Cucumis melo var. makuwa]4.29e-4983.84Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
        MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG G + L+         +HTKGFGSKMIAKM FVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH

KAA0050035.1 Zinc finger protein, putative isoform 1 [Cucumis melo var. makuwa]1.11e-3465.55Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG                         TGS AL+KSK+   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGIVNPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

TYK03638.1 Zinc finger CCCH-type with G patch domain-containing protein [Cucumis melo var. makuwa]2.31e-65100Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
        MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH

XP_008443898.1 PREDICTED: uncharacterized protein LOC103487380 isoform X2 [Cucumis melo]7.26e-3464.71Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------------------SRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG G                         S AL+KSK+   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------------------SRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGIVNPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

XP_011655819.1 uncharacterized protein LOC101215133 [Cucumis sativus]1.12e-3464.71Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG                         TGS AL+K+KK   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGI+NPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

TrEMBL top hitse value%identityAlignment
A0A0A0LTU7 Protein SQS11.0e-2964.71Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG                         TGS AL+K+KK   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGI+NPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

A0A1S3B932 uncharacterized protein LOC103487380 isoform X15.2e-2964.71Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------------------SRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG G                         S AL+KSK+   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------------------SRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGIVNPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

A0A5A7U469 Zinc finger CCCH-type with G patch domain-containing protein6.7e-3783.84Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
        MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG G + L+         +HTKGFGSKMIAKM FVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH

A0A5A7U8V1 Protein SQS11.0e-2965.55Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS
        MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLG                         TGS AL+KSK+   FEVHTKGFGSKM+AKM FVEGM LGKDS
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLG-------------------------TGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDS

Query:  QGIVNPLLPVRWPKALRIG
        QGIVNPLLPVR PKA  +G
Subjt:  QGIVNPLLPVRWPKALRIG

A0A5D3BXD8 Zinc finger CCCH-type with G patch domain-containing protein1.5e-49100Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
        MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH

SwissProt top hitse value%identityAlignment
A1XD97 Tuftelin-interacting protein 115.0e-0541.54Show/hide
Query:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL
        PK L TG    K S+K +            +E HTKG G K++ KM +V G  LGK++QGI+NP+
Subjt:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL

A4UMC5 Tuftelin-interacting protein 112.9e-0538.75Show/hide
Query:  KDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL
        K G+   LP ++   PK L TG    K S+K +            +E HTKG G K++ KM +V G  LGK++QGI+NP+
Subjt:  KDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL

Q06AK6 Tuftelin-interacting protein 115.0e-0541.54Show/hide
Query:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL
        PK L TG    K S+K +            +E HTKG G K++ KM +V G  LGK++QGI+NP+
Subjt:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL

Q29RR5 Tuftelin-interacting protein 115.0e-0541.54Show/hide
Query:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL
        PK L TG    K S+K +            +E HTKG G K++ KM +V G  LGK++QGI+NP+
Subjt:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL

Q5U2Y6 Tuftelin-interacting protein 115.0e-0541.54Show/hide
Query:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL
        PK L TG    K S+K +            +E HTKG G K++ KM +V G  LGK++QGI+NP+
Subjt:  PKSLGTGSRALKKSKKNWC-----------FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPL

Arabidopsis top hitse value%identityAlignment
AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain3.3e-0435.14Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKD
        + KMG+ + GGLGK+ QG+  PIE   RPK++G G    K++K     +V  K      +++     G R GK+
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKD

AT2G24830.1 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein3.9e-0555.56Show/hide
Query:  FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLL
        +E HT+G  SKM+A M + EGM LG   QGI+NP+L
Subjt:  FEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLL

AT3G09850.1 D111/G-patch domain-containing protein3.3e-2042.03Show/hide
Query:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------SRALKKSKKN-----------------------------WCFEVHTKGFGSK
        MAKMGF+  GGLGKDG+G+  PIE ++RPKSLG G             S     +K+N                               FE HT GFGS+
Subjt:  MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTG-------------SRALKKSKKN-----------------------------WCFEVHTKGFGSK

Query:  MIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQ
        M+A+M FVEG  LG++SQGIVNPL+ VR P+A  IG +
Subjt:  MIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAATGGGATTCGTACAAGTTGGAGGACTAGGGAAAGATGGTCAAGGAATGACTCTACCCATTGAAGTGATGAAACGACCAAAATCACTAGGAACGGGGTCCCG
TGCTTTGAAAAAATCTAAAAAAAATTGGTGCTTTGAAGTGCACACTAAAGGATTTGGGTCGAAGATGATAGCAAAGATGAGATTTGTCGAAGGCATGAGATTGGGAAAAG
ATTCACAAGGGATAGTCAACCCTTTGCTTCCTGTTAGATGGCCTAAAGCTCTGAGGATTGGGAGGCAAATGTTACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAATGGGATTCGTACAAGTTGGAGGACTAGGGAAAGATGGTCAAGGAATGACTCTACCCATTGAAGTGATGAAACGACCAAAATCACTAGGAACGGGGTCCCG
TGCTTTGAAAAAATCTAAAAAAAATTGGTGCTTTGAAGTGCACACTAAAGGATTTGGGTCGAAGATGATAGCAAAGATGAGATTTGTCGAAGGCATGAGATTGGGAAAAG
ATTCACAAGGGATAGTCAACCCTTTGCTTCCTGTTAGATGGCCTAAAGCTCTGAGGATTGGGAGGCAAATGTTACATTAG
Protein sequenceShow/hide protein sequence
MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGTGSRALKKSKKNWCFEVHTKGFGSKMIAKMRFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH