; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020724 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020724
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionsnRNA-activating protein complex subunit-like
Genome locationchr12:17234743..17244494
RNA-Seq ExpressionIVF0020724
SyntenyIVF0020724
Gene Ontology termsGO:0009301 - snRNA transcription (biological process)
GO:0000987 - proximal promoter sequence-specific DNA binding (molecular function)
InterPro domainsIPR022042 - snRNA-activating protein complex, subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043314.1 snRNA-activating protein complex subunit-like isoform X2 [Cucumis melo var. makuwa]4.05e-19065.02Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW---------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ-
        RAGASDEIGLNGDGLSIPL G    P                                         IDELKLFTEEQLLNMALEESLQ   +  ++S+ 
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW---------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ-

Query:  -------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSV
                     E+E   +++ +       +S   M              EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ + ++  KE++  
Subjt:  -------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSV

Query:  T---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID
                                                K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID
Subjt:  T---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID

Query:  YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI
        YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI
Subjt:  YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI

Query:  VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_008459093.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo]6.67e-18863.52Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT
                                E+E   +++ +       +S   M              EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ +
Subjt:  ------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT

Query:  EANGEKEQMSVT---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
         ++  KE++                                          K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
Subjt:  EANGEKEQMSVT---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF

Query:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
        CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
Subjt:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP

Query:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_008459094.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X2 [Cucumis melo]6.62e-19065.16Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSVT
                    E+E   +++ +       +S   M              EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ + ++  KE++   
Subjt:  ------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSVT

Query:  ---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
                                               K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
Subjt:  ---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY

Query:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
        SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
Subjt:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV

Query:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_008459095.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo]2.79e-18863.52Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT
                                E+E   +++ +       +S   M              EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ +
Subjt:  ------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT

Query:  EANGEKEQMSVT---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
         ++  KE++                                          K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
Subjt:  EANGEKEQMSVT---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF

Query:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
        CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
Subjt:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP

Query:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

XP_016901523.1 PREDICTED: snRNA-activating protein complex subunit-like [Cucumis melo]6.80e-18563.87Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGAS+EIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSVT
                    E+E   +++ +       +S   M              EKSIAKVAEI KLKQKQEADRAVVQLHAFK+   ++ + ++  KE++   
Subjt:  ------------EQEATSNSVSSLLPDFPQQSMRGMFLNTL---------EKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSVT

Query:  ---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
                                               K ++SQEFLALGRQTLAELKDKIYCSTD LMQKAE QDSSGYFLVEDVFCNDLRNPSAIDY
Subjt:  ---------------------------------------KCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY

Query:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
        SKPILDWLRNSEDEARKKWECIITGE QQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
Subjt:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV

Query:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        TFQLRTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

TrEMBL top hitse value%identityAlignment
A0A1S3C9D9 snRNA-activating protein complex subunit-like isoform X23.4e-15365.16Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ---------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM---
                             E +  SN+  S      ++  +       EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ + ++  KE++   
Subjt:  ---------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM---

Query:  ------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
                                               K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
Subjt:  ------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY

Query:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
        SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
Subjt:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV

Query:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S3C9H5 snRNA-activating protein complex subunit-like isoform X18.5e-15263.52Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ---------------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT
                                         E +  SN+  S      ++  +       EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ +
Subjt:  ---------------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT

Query:  EANGEKEQM---------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
         ++  KE++                                          K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
Subjt:  EANGEKEQM---------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF

Query:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
        CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
Subjt:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP

Query:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S3CAL2 snRNA-activating protein complex subunit-like isoform X38.5e-15263.52Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGASDEIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ---------------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT
                                         E +  SN+  S      ++  +       EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ +
Subjt:  ---------------------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWT

Query:  EANGEKEQM---------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
         ++  KE++                                          K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF
Subjt:  EANGEKEQM---------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVF

Query:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
        CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP
Subjt:  CNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHP

Query:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  EDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S4DZX0 snRNA-activating protein complex subunit-like2.3e-14963.87Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--
        RAGAS+EIGLNGDGLSIPL G    P                                        IDELKLFTEEQLLNMALEESLQ   +  ++S+  
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW--------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ--

Query:  ---------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM---
                             E +  SN+  S      ++  +       EKSIAKVAEI KLKQKQEADRAVVQLHAFK+   ++ + ++  KE++   
Subjt:  ---------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM---

Query:  ------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY
                                               K ++SQEFLALGRQTLAELKDKIYCSTD LMQKAE QDSSGYFLVEDVFCNDLRNPSAIDY
Subjt:  ------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDY

Query:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
        SKPILDWLRNSEDEARKKWECIITGE QQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV
Subjt:  SKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIV

Query:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        TFQLRTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  TFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

A0A5A7TJ23 snRNA-activating protein complex subunit-like isoform X24.5e-15365.02Show/hide
Query:  RAGASDEIGLNGDGLSIPLVGLYMHPTW---------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ-
        RAGASDEIGLNGDGLSIPL G    P                                         IDELKLFTEEQLLNMALEESLQ   +  ++S+ 
Subjt:  RAGASDEIGLNGDGLSIPLVGLYMHPTW---------------------------------------IDELKLFTEEQLLNMALEESLQFQSSYVSRSQ-

Query:  ----------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM--
                              E +  SN+  S      ++  +       EKSIAKVAEIAKLKQKQEADRAVVQLHAFK+   ++ + ++  KE++  
Subjt:  ----------------------EQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQM--

Query:  -------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID
                                                K ++SQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID
Subjt:  -------------------------------------SVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID

Query:  YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI
        YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI
Subjt:  YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPI

Query:  VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  VTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

SwissProt top hitse value%identityAlignment
Q4R6Y6 snRNA-activating protein complex subunit 31.7e-3234.91Show/hide
Query:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN
        Q  L LG Q L EL+D I C +D  +         +A +  S     S +F  E  F ND R P   D S+ I++W                        
Subjt:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN

Query:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE
            E  D     F++  M    F DL  +LG  YLYCHQGDC+H IVI D+RL+H +D  DR  YP++  +     +KC VC +Y A+  T +D +A E
Subjt:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE

Query:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q5BK68 snRNA-activating protein complex subunit 33.4e-3334.91Show/hide
Query:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN
        Q  L LG Q L EL+D I C +D  +         +A +  S     S +F  E  F ND R P   D S+ I++W                        
Subjt:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN

Query:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE
            E  D     F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR  YP++T +     +KC VC +Y A+  T +D +A E
Subjt:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE

Query:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q5E9M5 snRNA-activating protein complex subunit 31.7e-3234.48Show/hide
Query:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN
        Q  L LG Q L EL+D I C +D  +         +A +  S     S +F  E  F ND R P   D S+ I++W                        
Subjt:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN

Query:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE
            E  D     F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR  YP++  +     +KC VC +Y A+  T +D +A E
Subjt:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE

Query:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q8L627 snRNA-activating protein complex subunit9.8e-8145.97Show/hide
Query:  FTEEQLLNMALEESL---QFQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGL---FEVWTE
        F E+ L    LE SL     ++    R++ +    N+          + M+     T E  + KV ++AKLKQKQE D+A V LH F        +V   
Subjt:  FTEEQLLNMALEESL---QFQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGL---FEVWTE

Query:  ANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRN
          G ++  S+                                  ++ +++QEFL LGRQ L ELKD I+C+TD +MQKA + D SGYFL+EDVF NDLRN
Subjt:  ANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRN

Query:  PSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHD
        PSA DYS PILDWL NS+DEA KKWEC++TGELQ+K   V+GE   + +P +R+  M    FCD++FR+GA Y+YCHQGDCKHTIVIRDMR+ HPEDV +
Subjt:  PSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHD

Query:  RAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        RAAYPI+ F  + R QKC VC I RA K  +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  RAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

Q9D2C9 snRNA-activating protein complex subunit 33.4e-3334.91Show/hide
Query:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN
        Q  L LG Q L EL+D I C +D  +         +A +  S     S +F  E  F ND R P   D S+ I++W                        
Subjt:  QEFLALGRQTLAELKDKIYCSTDTLM--------QKAEQQDS-----SGYFLVEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKN

Query:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE
            E  D     F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR  YP++T +     +KC VC +Y A+  T +D +A E
Subjt:  SVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQE

Query:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Arabidopsis top hitse value%identityAlignment
AT1G28560.1 snRNA activating complex family protein7.0e-8245.97Show/hide
Query:  FTEEQLLNMALEESL---QFQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGL---FEVWTE
        F E+ L    LE SL     ++    R++ +    N+          + M+     T E  + KV ++AKLKQKQE D+A V LH F        +V   
Subjt:  FTEEQLLNMALEESL---QFQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGL---FEVWTE

Query:  ANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRN
          G ++  S+                                  ++ +++QEFL LGRQ L ELKD I+C+TD +MQKA + D SGYFL+EDVF NDLRN
Subjt:  ANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRN

Query:  PSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHD
        PSA DYS PILDWL NS+DEA KKWEC++TGELQ+K   V+GE   + +P +R+  M    FCD++FR+GA Y+YCHQGDCKHTIVIRDMR+ HPEDV +
Subjt:  PSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHD

Query:  RAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        RAAYPI+ F  + R QKC VC I RA K  +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  RAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

AT1G28560.2 snRNA activating complex family protein2.0e-8144.91Show/hide
Query:  FTEEQLLNMALEESLQ--------------FQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKF
        F E+ L    LE SL               F++    R++ +    N+          + M+     T E  + KV ++AKLKQKQE D+A V LH F  
Subjt:  FTEEQLLNMALEESLQ--------------FQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLNTLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKF

Query:  GL---FEVWTEANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFL
              +V     G ++  S+                                  ++ +++QEFL LGRQ L ELKD I+C+TD +MQKA + D SGYFL
Subjt:  GL---FEVWTEANGEKEQMSV----------------------------------TKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFL

Query:  VEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRD
        +EDVF NDLRNPSA DYS PILDWL NS+DEA KKWEC++TGELQ+K   V+GE   + +P +R+  M    FCD++FR+GA Y+YCHQGDCKHTIVIRD
Subjt:  VEDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNS-VVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRD

Query:  MRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        MR+ HPEDV +RAAYPI+ F  + R QKC VC I RA K  +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  MRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAAACTACTCCCGTTCGGTAGATCGGCGGTTTTTGTAGGTTTTGGAGCAATTTCTCCATGGCGGGCTGGAGCTTCAGATGAGATTGGTCTTAATGGAGATGG
CCTCTCAATTCCTTTGGTGGGCCTATATATGCACCCAACTTGGATTGACGAACTTAAGTTATTTACTGAAGAACAGTTATTGAATATGGCCTTGGAGGAATCATTGCAGT
TTCAGTCTAGCTACGTCTCAAGATCACAAGAACAAGAAGCAACAAGCAATTCTGTGTCATCACTTCTTCCAGATTTTCCACAACAGAGCATGAGAGGCATGTTTCTTAAC
ACCCTAGAGAAATCTATCGCAAAAGTGGCTGAAATTGCAAAACTTAAACAAAAACAGGAGGCAGACAGAGCTGTAGTGCAATTACATGCTTTCAAGTTTGGCCTTTTCGA
AGTCTGGACTGAAGCAAATGGAGAAAAGGAGCAGATGAGTGTTACAAAGTGTATTAGATCTCAAGAGTTCTTGGCCCTTGGACGACAAACGTTAGCTGAACTGAAGGACA
AGATTTATTGCTCGACAGATACGTTAATGCAAAAGGCTGAGCAGCAAGATTCATCTGGATATTTCCTTGTAGAAGATGTATTCTGCAATGATTTGAGGAATCCTTCCGCA
ATAGACTATAGCAAACCTATACTTGATTGGCTTAGAAACTCAGAGGATGAAGCTCGTAAGAAATGGGAATGCATCATAACCGGTGAATTGCAACAGAAAAATTCAGTTGT
AGGTGAAGTATCAGATTTACATGTGCCTCATTTTAGATCAGTCAGCATGAGCAAGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATC
AGGGAGATTGCAAACATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGCTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGA
GCTCAGAAATGCGATGTCTGCAACATTTACAGGGCTAAAAAGTTTACTCTTGATGACAAGTGGGCGCAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCT
TCACTACTCGAAAGAAGGGAACCTTCTTTACAACGACTTCGTGGTGCATGATTACTTGCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGAAACTACTCCCGTTCGGTAGATCGGCGGTTTTTGTAGGTTTTGGAGCAATTTCTCCATGGCGGGCTGGAGCTTCAGATGAGATTGGTCTTAATGGAGATGG
CCTCTCAATTCCTTTGGTGGGCCTATATATGCACCCAACTTGGATTGACGAACTTAAGTTATTTACTGAAGAACAGTTATTGAATATGGCCTTGGAGGAATCATTGCAGT
TTCAGTCTAGCTACGTCTCAAGATCACAAGAACAAGAAGCAACAAGCAATTCTGTGTCATCACTTCTTCCAGATTTTCCACAACAGAGCATGAGAGGCATGTTTCTTAAC
ACCCTAGAGAAATCTATCGCAAAAGTGGCTGAAATTGCAAAACTTAAACAAAAACAGGAGGCAGACAGAGCTGTAGTGCAATTACATGCTTTCAAGTTTGGCCTTTTCGA
AGTCTGGACTGAAGCAAATGGAGAAAAGGAGCAGATGAGTGTTACAAAGTGTATTAGATCTCAAGAGTTCTTGGCCCTTGGACGACAAACGTTAGCTGAACTGAAGGACA
AGATTTATTGCTCGACAGATACGTTAATGCAAAAGGCTGAGCAGCAAGATTCATCTGGATATTTCCTTGTAGAAGATGTATTCTGCAATGATTTGAGGAATCCTTCCGCA
ATAGACTATAGCAAACCTATACTTGATTGGCTTAGAAACTCAGAGGATGAAGCTCGTAAGAAATGGGAATGCATCATAACCGGTGAATTGCAACAGAAAAATTCAGTTGT
AGGTGAAGTATCAGATTTACATGTGCCTCATTTTAGATCAGTCAGCATGAGCAAGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATC
AGGGAGATTGCAAACATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGCTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGA
GCTCAGAAATGCGATGTCTGCAACATTTACAGGGCTAAAAAGTTTACTCTTGATGACAAGTGGGCGCAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCT
TCACTACTCGAAAGAAGGGAACCTTCTTTACAACGACTTCGTGGTGCATGATTACTTGCAAGATTAG
Protein sequenceShow/hide protein sequence
MASKLLPFGRSAVFVGFGAISPWRAGASDEIGLNGDGLSIPLVGLYMHPTWIDELKLFTEEQLLNMALEESLQFQSSYVSRSQEQEATSNSVSSLLPDFPQQSMRGMFLN
TLEKSIAKVAEIAKLKQKQEADRAVVQLHAFKFGLFEVWTEANGEKEQMSVTKCIRSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSA
IDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR
AQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD