; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020751 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020751
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description30S ribosomal protein S18, chloroplastic
Genome locationtig00000662:84914..85219
RNA-Seq ExpressionIVF0020751
SyntenyIVF0020751
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001648 - Ribosomal protein S18
IPR018275 - Ribosomal protein S18, conserved site
IPR036870 - Ribosomal protein S18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QTA71770.1 ribosomal protein S18 [Coriaria nepalensis]1.13e-5798.02Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTART+GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_004841805.1 ribosomal protein S18 [Cucumis melo subsp. melo]4.81e-59100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009236302.1 ribosomal protein S18 [Gynostemma pentaphyllum]7.98e-5899.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009439913.1 ribosomal protein S18 [Gynostemma caulopterum]2.29e-5798.02Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVN+LTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009526324.1 ribosomal protein S18 [Hemsleya lijiangensis]4.62e-5798.02Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLIT AIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
TrEMBL top hitse value%identityAlignment
A0A1S4EU31 30S ribosomal protein S18, chloroplastic8.9e-45100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A249RXG5 30S ribosomal protein S18, chloroplastic8.9e-45100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A249RYZ0 30S ribosomal protein S18, chloroplastic8.9e-45100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A249RZ91 30S ribosomal protein S18, chloroplastic8.9e-45100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A286NFZ0 30S ribosomal protein S18, chloroplastic8.9e-45100Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
SwissProt top hitse value%identityAlignment
A0ZZ57 30S ribosomal protein S18, chloroplastic1.1e-4496.04Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSEST RT  LRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
B1A957 30S ribosomal protein S18, chloroplastic9.5e-4494.06Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLF KSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFERSEST +T GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q0ZIZ8 30S ribosomal protein S18, chloroplastic5.6e-4495.05Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKR FLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFER+ESTART GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q2L928 30S ribosomal protein S18, chloroplastic5.6e-4495.05Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFERSEST RT  LRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q4VZJ5 30S ribosomal protein S18, chloroplastic8.6e-4595.19Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN---NEKQFERSESTARTIGLR
        MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN   N+KQFERSEST RTIGLR
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN---NEKQFERSESTARTIGLR

Query:  TRNK
        TRNK
Subjt:  TRNK
Arabidopsis top hitse value%identityAlignment
AT1G07210.1 Ribosomal protein S189.9e-0440.82Show/hide
Query:  DYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPF
        D+RN+  ++ FI+E G I+ R+   ++ K QR I   IK AR   L+PF
Subjt:  DYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPF
ATCG00650.1 ribosomal protein S183.7e-4391.09Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        M+KSKRLF KSKRSFRRRLPPI SGDRIDYRNMSLISRFISEQGKILSRRVNR+TLKQQRLITIAIKQARILSLLPFLNN+KQFERSEST RT  LRTR 
Subjt:  MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATTCCATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAG
TCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTATCTT
TGTTACCTTTTCTTAATAATGAGAAACAATTTGAAAGAAGCGAGTCGACCGCTAGAACTATTGGTCTTAGAACCAGGAATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATTCCATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAG
TCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTATCTT
TGTTACCTTTTCTTAATAATGAGAAACAATTTGAAAGAAGCGAGTCGACCGCTAGAACTATTGGTCTTAGAACCAGGAATAAATAG
Protein sequenceShow/hide protein sequence
MDKSKRLFLKSKRSFRRRLPPIPSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRNK