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IVF0020761 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020761
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:6597494..6597664
RNA-Seq ExpressionIVF0020761
SyntenyIVF0020761
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041582.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.92e-2278.57Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        MDN+CWK V   WESPS +DAA K  LKPEITWTKEEDEESLEN R+LNALFNGVD
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
KAA0056014.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.43e-2994.55Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGV
        MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRA+NALFN +
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGV
TYK19674.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.05e-2378.57Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        MDN+CWK V   WESPS +DAA K  LKPEITWTKEEDEESLEN R+LNALFNGVD
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
TYK21554.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.71e-1969.64Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        +D+KCWKVV I WE  ST+DAA K+ LKP+I+W+KEEDE SL NSRALN LFNG+D
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
TYK27701.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.71e-2996.36Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGV
        MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN +
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGV
TrEMBL top hitse value%identityAlignment
A0A5A7TDV3 Gag-pol polyprotein7.4e-1778.57Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        MDN+CWK V   WESPS +DAA K  LKPEITWTKEEDEESLEN R+LNALFNGVD
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
A0A5A7ULF0 Gag-pol polyprotein3.5e-2298.11Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN
        MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRA+NALFN
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN
A0A5D3D805 Gag-pol polyprotein7.4e-1778.57Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        MDN+CWK V   WESPS +DAA K  LKPEITWTKEEDEESLEN R+LNALFNGVD
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
A0A5D3DD91 Gag-pol polyprotein1.2e-1469.64Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
        +D+KCWKVV I WE  ST+DAA K+ LKP+I+W+KEEDE SL NSRALN LFNG+D
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD
A0A5D3DVE7 Gag-pol polyprotein2.0e-22100Show/hide
Query:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN
        MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN
Subjt:  MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATAAATGTTGGAAGGTTGTGTTTATCGAGTGGGAGTCACCATCTACCAGAGATGCTGCCGACAAAATCATGTTGAAGCCAGAAATCACCTGGACCAAAGAAGA
GGATGAAGAATCTCTTGAAAACTCTCGAGCCCTGAATGCCCTATTTAATGGTGTAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATAAATGTTGGAAGGTTGTGTTTATCGAGTGGGAGTCACCATCTACCAGAGATGCTGCCGACAAAATCATGTTGAAGCCAGAAATCACCTGGACCAAAGAAGA
GGATGAAGAATCTCTTGAAAACTCTCGAGCCCTGAATGCCCTATTTAATGGTGTAGATTAA
Protein sequenceShow/hide protein sequence
MDNKCWKVVFIEWESPSTRDAADKIMLKPEITWTKEEDEESLENSRALNALFNGVD