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IVF0020778 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020778
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:15784388..15784631
RNA-Seq ExpressionIVF0020778
SyntenyIVF0020778
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]4.59e-13100Show/hide
Query:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]2.41e-1397.3Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKP EQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]6.92e-14100Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]6.92e-14100Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.59e-13100Show/hide
Query:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein3.6e-10100Show/hide
Query:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
A0A5A7UVX0 PMD domain-containing protein2.8e-1097.3Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKP EQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
A0A5A7V2J6 Uncharacterized protein9.5e-11100Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
A0A5D3BW91 Uncharacterized protein9.5e-11100Show/hide
Query:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
A0A5D3D7V4 PMD domain-containing protein3.6e-10100Show/hide
Query:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
        GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
Subjt:  GPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCTCACGCAGTTGATTCGGCCTTTGAGGAAGTTGGTACCTCGAAAACTCCCGTCAATAAACCGGCTGAACAATCCTTACGCCCATCTGCTCTTCTCGAGGAGAT
TCCCCTTTATCCAAAGAAGGTGTCTATCCTAAAGCATCTTTACAAAAAGTTAGCTCAGCACATGCTCCCCTTAAGTTTTCTGAATTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACCTCACGCAGTTGATTCGGCCTTTGAGGAAGTTGGTACCTCGAAAACTCCCGTCAATAAACCGGCTGAACAATCCTTACGCCCATCTGCTCTTCTCGAGGAGAT
TCCCCTTTATCCAAAGAAGGTGTCTATCCTAAAGCATCTTTACAAAAAGTTAGCTCAGCACATGCTCCCCTTAAGTTTTCTGAATTACCATTAG
Protein sequenceShow/hide protein sequence
MGPHAVDSAFEEVGTSKTPVNKPAEQSLRPSALLEEIPLYPKKVSILKHLYKKLAQHMLPLSFLNYH