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IVF0020784 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020784
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationchr08:6698909..6702026
RNA-Seq ExpressionIVF0020784
SyntenyIVF0020784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647470.1 hypothetical protein Csa_004096 [Cucumis sativus]1.12e-6781.65Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN T
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_004148639.1 neurofilament medium polypeptide isoform X2 [Cucumis sativus]5.88e-7081.65Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN T
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]9.51e-9290.8Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]4.21e-96100Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_031744063.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis sativus]8.76e-6674.57Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENN

Query:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        PPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.0e-5074.57Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENN

Query:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        PPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X28.4e-74100Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.1e-7090.8Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.1e-7090.8Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 11.2e-1445.27Show/hide
Query:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEGADPPEKQ-----------------
        MGACATKPK +K +SG+AP   PA          ETK  D   D +  EI VD+DK +           ++EKT  ADP EK+                 
Subjt:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEGADPPEKQ-----------------

Query:  --ETNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEV-KVI
          ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+ V KVI
Subjt:  --ETNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEV-KVI

Query:  N
        +
Subjt:  N

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGTCCGGCGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAGGCGAA
GGAGATCGTGGTCGACGATGACAAGAAAGAAGGTAATAAGGAGAAGACAGAAGGTGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAG
ACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCAGCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCATCAGAGAAATTAATGGAAACC
CCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGACAAGATCAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCATCGGAGAAACC
AACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAA
mRNA sequenceShow/hide mRNA sequence
CACTTTCATTCATTCATTCACACACACACACACAACGACAACAGAAGAAAAAAAAAAGAAAAGATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGTCCGG
CGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTGGTCGACGATGACAAGAAAGAAGGTAATAAGGAGAAGA
CAGAAGGTGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAGACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCA
GCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCATCAGAGAAATTAATGGAAACCCCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGACAAGAT
CAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCATCGGAGAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAATAAATAATTT
TCAAAACAAAAATCCCTTCATTAGTTAATTACGCTGAGGAACCAATATCCAAATTGTTTCATTTTCGTCTTCCTTTTTTCCTTTTAGGTATGTTATGAATTATGGGGAAA
AATACATACCTTCATCTTTACTTCTCTCTTAACTACGTACTCTTTGTTTCTACTTTATGTTTCTGTCTCTGTTTCATAGCCCAAAAAGTACCTCTAA
Protein sequenceShow/hide protein sequence
MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMET
PNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN