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IVF0020822 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020822
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExopolygalacturonase-like
Genome locationchr04:27662559..27662863
RNA-Seq ExpressionIVF0020822
SyntenyIVF0020822
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045608.1 exopolygalacturonase-like [Cucumis melo var. makuwa]2.14e-2585.71Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFV LLP+LLLLVSNSKAQS+GGVFD+T Y AKPNAD+T ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

KAA0053892.1 exopolygalacturonase-like [Cucumis melo var. makuwa]7.49e-31100Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
        MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP

TYK25514.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.66e-30100Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
        MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP

TYK28802.1 exopolygalacturonase-like [Cucumis melo var. makuwa]7.74e-2785.71Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFVALL +LLLLVSNSKAQS+GGVFD+T Y AKPNAD+T ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

XP_008449696.2 PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]4.65e-2587.3Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFVALLP+LLLLVSNSKAQS  GVFD+T Y AKPNADIT ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

TrEMBL top hitse value%identityAlignment
A0A1S3BML3 LOW QUALITY PROTEIN: exopolygalacturonase-like4.2e-2087.3Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFVALLP+LLLLVSNSKAQS  GVFD+T Y AKPNADIT ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

A0A5A7TRZ0 Exopolygalacturonase-like2.4e-2085.71Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFV LLP+LLLLVSNSKAQS+GGVFD+T Y AKPNAD+T ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

A0A5A7UDN1 Exopolygalacturonase-like6.8e-23100Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
        MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP

A0A5D3BAU1 Exopolygalacturonase4.2e-2087.3Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        MGLISNFVALLP+LLLLVSNSKAQS  GVFD+T Y AKPNADIT ALASAWKE CASTTPSKV
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

A0A5D3DPL7 Exopolygalacturonase-like6.8e-23100Show/hide
Query:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
        MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP
Subjt:  MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTP

SwissProt top hitse value%identityAlignment
Q05967 Polygalacturonase4.7e-0550Show/hide
Query:  LLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        L+LL      +S  GVFD+T Y A  NADI+ AL +A+KE C ST+PS +
Subjt:  LLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

Q40312 Polygalacturonase8.1e-0545.45Show/hide
Query:  ALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        A++   L +     AQS  GV D++ +  KPN+DI  AL SAW E CASTT +K+
Subjt:  ALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

W8P8Q3 Probable galacturan 1,4-alpha-galacturonidase SALK61.9e-0646.55Show/hide
Query:  NFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV
        N   L+ L  L VS +++Q   G  D+T + AKPNAD T+AL +AWKE CA+  P+K+
Subjt:  NFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGATATCAAATTTTGTGGCATTACTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTACGGGTGGTGTTTTTGATGTCACAACATACGATGC
TAAACCTAATGCTGATATAACTACGGCTTTGGCAAGTGCATGGAAGGAGGTATGTGCATCAACCACTCCAAGTAAAGTTTTTGGATTCCAAAAGGAAGATATGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGATATCAAATTTTGTGGCATTACTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTACGGGTGGTGTTTTTGATGTCACAACATACGATGC
TAAACCTAATGCTGATATAACTACGGCTTTGGCAAGTGCATGGAAGGAGGTATGTGCATCAACCACTCCAAGTAAAGTTTTTGGATTCCAAAAGGAAGATATGGATTAA
Protein sequenceShow/hide protein sequence
MGLISNFVALLPLLLLLVSNSKAQSTGGVFDVTTYDAKPNADITTALASAWKEVCASTTPSKVFGFQKEDMD