CuGenDBv2

Gene ID	IVF0020824
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	tig00001265:346975..352378
RNA-Seq Expression	IVF0020824
Synteny	IVF0020824
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8650015.1 hypothetical protein Csa_009730 [Cucumis sativus]

2.62e-226

96.01

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

XP_008448608.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo]

7.27e-233

96.74

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY

Query:  PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS

XP_008448609.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo]

2.13e-236

100

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NKLACVHQQEEMPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

XP_031738157.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]

9.78e-224

93.15

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV          FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK

Query:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYP
        VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYP
Subjt:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYP

Query:  GPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
        GPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Subjt:  GPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS

XP_038877167.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]

4.90e-219

93.87

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHFSNANFASSS I TA+LPL SP LACFRISHRKTHRSF+ SS+FEF  RRNLRV   S SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NK  CVHQQE+MPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L151 DUF1995 domain-containing protein

4.9e-177

96.01

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

A0A1S3BK29 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1

1.5e-181

96.74

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY

Query:  PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS

A0A1S3BKQ4 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2

4.1e-184

100

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NKLACVHQQEEMPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

A0A6J1E988 protein LOW PSII ACCUMULATION 3, chloroplastic

7.6e-162

89.26

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        M+FSNANF SSSTI  AVLPL S   ACFR+SHRK HRS +SSS+ EFM  RNLRVL  S SNR++S+ STD DVPFPRDY DLL+QAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NK  CVHQQ++MPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

A0A6J1HNL5 protein LOW PSII ACCUMULATION 3, chloroplastic

1.3e-161

89.26

Show/hide

Query:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK
        M+FSNA F SSSTI  AVLPL S   ACFR+ HRK HRS +SSS+ EFM  RNLRVL  S SNR++S+ STD DVPFPRDY DLL+QAKKATEAALRDNK
Subjt:  MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKLACVHQQEEMPSLKEVALNILPSS
        NKL CVHQQ++MPSLKEVALNILPSS
Subjt:  NKLACVHQQEEMPSLKEVALNILPSS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

1.0e-06

24.15

Show/hide

Query:  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANE
        S   NS+    + +  P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E
Subjt:  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANE

Query:  VKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL
         + A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN EL
Subjt:  VKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL

Query:  DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKLACVHQQEEMPSLKEVALNIL
        D +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++     ACV +     +L E    +L
Subjt:  DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKLACVHQQEEMPSLKEVALNIL

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

7.3e-08

24.15

Show/hide

Query:  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANE
        S   NS+    + +  P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E
Subjt:  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANE

Query:  VKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL
         + A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN EL
Subjt:  VKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL

Query:  DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKLACVHQQEEMPSLKEVALNIL
        D +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++     ACV +     +L E    +L
Subjt:  DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKLACVHQQEEMPSLKEVALNIL

AT5G48790.1 Domain of unknown function (DUF1995)

1.9e-120

77.45

Show/hide

Query:  RNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVF
        RNL+    S+S   N+N S D +VPFPRDY +L+NQAK+A E AL+D KQLMEIEFPT+GL SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+F
Subjt:  RNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVF

Query:  FPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPP
        FPEANEVKFA+ T F G  FKLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYP 
Subjt:  FPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPP

Query:  FFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS
        FFYPKLAAL KTL PKMETVYYIHNFKGQKGGVLFR YPGPW+VLR+ RNK  CVHQQE MPSLKEVAL+IL S+
Subjt:  FFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS

Sequences

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CDS sequence

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ATGCATTTCTCCAACGCCAATTTTGCTTCTTCCTCTACCATTTCCACTGCGGTTCTTCCACTTTCTTCTCCAGAGCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCA
TCGGAGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCCGCCGAGTTTGAGTAATCGTCAGAATAGCAATGCGTCGACTGATTTAG
ATGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCTGCTTTAAGAGACAACAAACAGTTGATGGAGATCGAATTTCCAACTGCT
GGTCTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGCGATTGCTTCATAGATCCACTGAAAGCCACTCG
CACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACGGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGG
ATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAA
GAGCTTTACAAGGAAGCCGTCCAAAACACTACTCGAAAACTCATAATATTCAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCT
GGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGAAGCTACCCAGGTCCTTGGA
AAGTGCTTAGAAAAGTGAGAAACAAATTAGCCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCTTCCATCATCTTAA

mRNA sequence

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ATAGAGACCTCTCGTTTGGAGGAAAGAATATCAATCATCAATACTCTCTCTCTCTTTCTCTTTTGCTTTCAATTTTCACTTCGAAGTTCAGCAGAAATGCATTTCTCCAA
CGCCAATTTTGCTTCTTCCTCTACCATTTCCACTGCGGTTCTTCCACTTTCTTCTCCAGAGCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCATCGGAGTTTCGTTT
CCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCCGCCGAGTTTGAGTAATCGTCAGAATAGCAATGCGTCGACTGATTTAGATGTTCCGTTTCCT
CGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCTGCTTTAAGAGACAACAAACAGTTGATGGAGATCGAATTTCCAACTGCTGGTCTTGAATCAGT
TCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGCGATTGCTTCATAGATCCACTGAAAGCCACTCGCACCAGAGTATTCT
TTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACGGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTT
GAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGA
AGCCGTCCAAAACACTACTCGAAAACTCATAATATTCAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGA
AGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGAAGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAA
GTGAGAAACAAATTAGCCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCTTCCATCATCTTAAGGGTCAATTATATTAGTTGGTAT
CCCCATTTACTGTCATGTGAAGAGGATGCTATGTTCCTTTCACATCAAAGTCTCTTCTCTGGTAAAATGCTCCATATCGATATAATAATCTGTATATTCTTTTTCTAGAT
ATTTAGCGTCCACAGAATTGACGATGAAATGCCTAAAAACTGAACATATTTAGGGACCCCTTTTTTTCACTTTATTTCAAGACCAAATTCACC

Protein sequence

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MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTA
GLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVE
ELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS

IVF0020824 (gene) of Melon (IVF77) v1 genome