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IVF0020843 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020843
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein SKIP34
Genome locationchr08:4654286..4654817
RNA-Seq ExpressionIVF0020843
SyntenyIVF0020843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647547.1 hypothetical protein Csa_002974 [Cucumis sativus]1.30e-4997.67Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV
        MCNGHHRPLFRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV

XP_008440533.1 PREDICTED: protein SKIP34 [Cucumis melo]4.19e-5297.75Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

XP_011657944.1 protein SKIP34 [Cucumis sativus]5.73e-5095.51Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHRPLFRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

XP_022950522.1 protein SKIP34 [Cucurbita moschata]5.88e-4186.67Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGA-ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHR LFRGS  P QTSVPENG  ASVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGA-ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

XP_038882165.1 protein SKIP34 [Benincasa hispida]1.35e-4588.76Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHR LFRGS  PYQ S+PENG ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQY+DRQEYV  +
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KIR5 Uncharacterized protein2.8e-3795.51Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHRPLFRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

A0A1S3B1B8 protein SKIP346.7e-3997.75Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

A0A5D3CN14 Protein SKIP346.7e-3997.75Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

A0A6J1GF20 protein SKIP341.9e-3086.67Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGA-ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHR LFRGS  P QTSVPENG  ASVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGA-ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

A0A6J1IV54 protein SKIP342.5e-3084.27Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MCNGHHR LFRGS  P QTSVPENG ASVVDNLRGRL ETE RLAQVRAREA LSR+LEEMKRLVSVMEIL+NYLKR+Y DRQEYV  L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

SwissProt top hitse value%identityAlignment
Q8GWU7 Protein SKIP341.0e-1249.44Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MC GH++ L   S    ++   E+   SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ ++++ ++ L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL

Arabidopsis top hitse value%identityAlignment
AT5G65495.1 unknown protein7.3e-1449.44Show/hide
Query:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL
        MC GH++ L   S    ++   E+   SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ ++++ ++ L
Subjt:  MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAACGGCCACCACCGACCATTGTTCAGAGGTAGCCCTCCTCCATACCAGACCTCCGTACCGGAAAACGGCGCCGCATCCGTTGTGGACAACCTACGGGGCCGATT
AGAAGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGGTTAGTATCTGTGATGGAGATCCTCGAGAACT
ACCTGAAACGGCAGTACAGCGACCGTCAAGAATATGTGAGCGAGTTGCAAATCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTAACGGCCACCACCGACCATTGTTCAGAGGTAGCCCTCCTCCATACCAGACCTCCGTACCGGAAAACGGCGCCGCATCCGTTGTGGACAACCTACGGGGCCGATT
AGAAGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGGTTAGTATCTGTGATGGAGATCCTCGAGAACT
ACCTGAAACGGCAGTACAGCGACCGTCAAGAATATGTGAGCGAGTTGCAAATCGCTTAG
Protein sequenceShow/hide protein sequence
MCNGHHRPLFRGSPPPYQTSVPENGAASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVSELQIA