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IVF0020872 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020872
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationchr05:23662109..23662285
RNA-Seq ExpressionIVF0020872
SyntenyIVF0020872
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016126 - sterol biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway (biological process)
GO:0032259 - methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031967 - organelle envelope (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004496 - mevalonate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038090.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]1.35e-1987.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERL+F+EQEILE+RTEMKKLPAMEENMSLISKSIEN NVQMEKQQLQQQ  +
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
KAA0047952.1 mevalonate kinase-like [Cucumis melo var. makuwa]1.32e-2298.28Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERLNFVEQEILE RTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
KAA0055708.1 protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]1.85e-1987.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEE+L+FVEQEILEMRTE+KKLPAMEENMSLISKSIEN N QMEKQQ+QQQ IL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
TYK18323.1 mevalonate kinase-like [Cucumis melo var. makuwa]2.75e-23100Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
TYK20517.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]1.35e-1987.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERL+F+EQEILE+RTEMKKLPAMEENMSLISKSIEN NVQMEKQQLQQQ  +
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
TrEMBL top hitse value%identityAlignment
A0A5A7T409 Ty3-gypsy retroelement transposase5.0e-1687.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERL+F+EQEILE+RTEMKKLPAMEENMSLISKSIEN NVQMEKQQLQQQ  +
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
A0A5A7TWS1 Mevalonate kinase-like1.8e-1898.28Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERLNFVEQEILE RTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
A0A5A7UKW4 Protochlorophyllide-dependent translocon component 526.5e-1687.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEE+L+FVEQEILEMRTE+KKLPAMEENMSLISKSIEN N QMEKQQ+QQQ IL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
A0A5D3D455 Mevalonate kinase3.7e-19100Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
A0A5D3DAB4 Ty3-gypsy retroelement transposase5.0e-1687.93Show/hide
Query:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
        MAKKSEERL+F+EQEILE+RTEMKKLPAMEENMSLISKSIEN NVQMEKQQLQQQ  +
Subjt:  MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGAAGAGCGAAGAAAGACTGAACTTCGTTGAGCAAGAGATTCTGGAGATGAGGACAGAGATGAAGAAGTTACCTGCAATGGAAGAGAATATGTCCTTGATCTC
AAAGAGCATTGAGAATATTAACGTGCAGATGGAGAAACAGCAATTACAACAGCAAACTATTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGAAGAGCGAAGAAAGACTGAACTTCGTTGAGCAAGAGATTCTGGAGATGAGGACAGAGATGAAGAAGTTACCTGCAATGGAAGAGAATATGTCCTTGATCTC
AAAGAGCATTGAGAATATTAACGTGCAGATGGAGAAACAGCAATTACAACAGCAAACTATTCTGTAA
Protein sequenceShow/hide protein sequence
MAKKSEERLNFVEQEILEMRTEMKKLPAMEENMSLISKSIENINVQMEKQQLQQQTIL