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IVF0020880 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020880
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin regulated protein
Genome locationchr04:25144744..25145843
RNA-Seq ExpressionIVF0020880
SyntenyIVF0020880
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464949.1 PREDICTED: protein GAST1-like [Cucumis melo]1.54e-85100Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

XP_011652310.1 protein GAST1 [Cucumis sativus]4.99e-8295.73Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQ+IEILLFVVMLLNCVLL HN AISEAPTPQPQTS+NYSNPMHGVTEGSLQPQECG RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

XP_022980754.1 protein GAST1-like [Cucurbita maxima]1.13e-6779.83Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT--SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
        M RKQ+ E + F VML NC+LLA N +ISEAPTPQPQ+  S+NY +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT--SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK

Query:  QTCPCYNQWKTKRGGPKCP
        Q+CPCYN+WKTKRGGPKCP
Subjt:  QTCPCYNQWKTKRGGPKCP

XP_023516497.1 protein GAST1-like [Cucurbita pepo subsp. pepo]3.65e-6679.66Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSA-NYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQI+E + F VM LNC+LLA N +ISEAPTPQPQ+   N  +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSA-NYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  TCPCYNQWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  TCPCYNQWKTKRGGPKCP

XP_038903614.1 protein GAST1 [Benincasa hispida]3.98e-7286.44Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSN-PMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQ++ ++LF+VMLLNCVLL HN AISEAPTPQPQ+S NYS+ PMHGVTEGSLQPQECGPRCT RC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSN-PMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  TCPCYNQWKTKRGGPKCP
        TCPCYN+WKTKRGGPKCP
Subjt:  TCPCYNQWKTKRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LI43 Uncharacterized protein8.4e-5596.12Show/hide
Query:  MLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP
        MLLNCVLL HN AISEAPTPQPQTS+NYSNPMHGVTEGSLQPQECG RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP
Subjt:  MLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP

Query:  KCP
        KCP
Subjt:  KCP

A0A1S3CMR4 protein GAST1-like1.5e-64100Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

A0A6J1E399 protein GAST11.5e-4879.49Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        M RKQ + ++ F+VM LN VLL  N AISEAPTPQPQ   N+  PM GVTEGSLQPQECGPRCT RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQ+
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYN WKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

A0A6J1EQZ6 protein GAST1-like1.2e-4877.97Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT-SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQI+E   F V+LLNC+LLA N +ISEAPTPQP +   NY +PM GV+EGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT-SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  TCPCYNQWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  TCPCYNQWKTKRGGPKCP

A0A6J1J049 protein GAST1-like5.7e-5179.83Show/hide
Query:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT--SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
        M RKQ+ E + F VML NC+LLA N +ISEAPTPQPQ+  S+NY +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK
Subjt:  MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQT--SANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNK

Query:  QTCPCYNQWKTKRGGPKCP
        Q+CPCYN+WKTKRGGPKCP
Subjt:  QTCPCYNQWKTKRGGPKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 137.9e-2650Show/hide
Query:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYN
        + I++F +++L+ +L AH   +                     T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN
Subjt:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYN

Query:  QWKTKRGGPKCP
         WKTK GGPKCP
Subjt:  QWKTKRGGPKCP

P27057 Protein GAST15.5e-3561.26Show/hide
Query:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQ
        + I+LFV+++   V L  NQ          Q     +N ++GV+EG L PQ+C P+CT RCSKT++KKPCMFFCQKCCAKCLCVP GTYGNKQ+CPCYN 
Subjt:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQ

Query:  WKTKRGGPKCP
        WKTKRGGPKCP
Subjt:  WKTKRGGPKCP

P47926 Protein RSI-11.6e-2667.11Show/hide
Query:  YSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        +SN + G  +  L+P +C PRCT RCS T+ KKPCMFFCQKCCA CLCVP G YGNKQ+CPCYN WKT+ G PKCP
Subjt:  YSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Q6NMQ7 Gibberellin-regulated protein 61.9e-2775.76Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Q84J95 Gibberellin-regulated protein 54.6e-2672.73Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein1.3e-2875.76Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

AT2G30810.1 Gibberellin-regulated family protein2.8e-2651.4Show/hide
Query:  LFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTK
        L VV +++ +L A   +  +    Q Q  A + N      EGSL+P+EC   C  RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W TK
Subjt:  LFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTK

Query:  RGGPKCP
         GGPKCP
Subjt:  RGGPKCP

AT3G02885.1 GAST1 protein homolog 53.3e-2772.73Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

AT3G10185.1 Gibberellin-regulated family protein5.6e-2750Show/hide
Query:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYN
        + I++F +++L+ +L AH   +                     T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN
Subjt:  IEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYN

Query:  QWKTKRGGPKCP
         WKTK GGPKCP
Subjt:  QWKTKRGGPKCP

AT5G15230.2 GAST1 protein homolog 41.2e-2162.12Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YGNKQ C CYN WKT+ GGPKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAAGCAAATAATAGAGATATTGCTGTTTGTAGTAATGCTGCTGAATTGTGTTCTCTTAGCACACAATCAAGCCATTAGTGAGGCTCCAACACCACAGCCACA
GACTAGTGCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGA
AGCCATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAG
AGAGGAGGCCCCAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
CATCCATCCAAATGTGTGTGTATATATAACGATAATGTACACATTCTCAAATGAATCATCAACACAATCTCTCTCTCTTTCTCTCTCTCTCTCTATTTCTCTCTGCCTCT
CTCTATTATATATAGAATTTAGTTTGAAATAATGGGAAGGAAGCAAATAATAGAGATATTGCTGTTTGTAGTAATGCTGCTGAATTGTGTTCTCTTAGCACACAATCAAG
CCATTAGTGAGGCTCCAACACCACAGCCACAGACTAGTGCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGC
ACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAAC
TTGTCCTTGCTACAATCAATGGAAGACTAAGAGAGGAGGCCCCAAATGCCCTTGATTAATTTTCATTTTCATCATTTCATTTCCCAACAACAAAAAACCATCATTAGTCA
CTTCCTAATCTTCTTTTTGGAACGTCTCTATTCTTTCGTTGTACTTTTAAAAAGTGATAGTTTCATGAAGGGTGACTTCTTAAAAGTATATATTATATGAAATGGTTATT
GTTGTCTTGGCCTTTGATCATATACTAGACCGAG
Protein sequenceShow/hide protein sequence
MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTK
RGGPKCP