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IVF0020898 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020898
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin regulated protein
Genome locationchr03:26204765..26205444
RNA-Seq ExpressionIVF0020898
SyntenyIVF0020898
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142881.1 peamaclein [Cucumis sativus]3.04e-5998.82Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICC KCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

XP_008444582.1 PREDICTED: peamaclein-like [Cucumis melo]3.68e-60100Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

XP_022961995.1 peamaclein-like [Cucurbita moschata]6.99e-4780Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

XP_023546651.1 peamaclein [Cucurbita pepo subsp. pepo]4.05e-4680Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLL+ +L+LTSFL+LSL APGFC  KC  RC+KAGV+DRC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

XP_038885998.1 peamaclein-like [Benincasa hispida]6.30e-4983.53Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLTWLL+LTSFLELS  APG C  KC++RC+KAGV+DRCMKYCGICC KCGCVPSGTYGNKHECPCYGN+KNSKG  KCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LKN7 Uncharacterized protein2.2e-4498.82Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICC KCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

A0A1S3BAP8 peamaclein-like4.4e-45100Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

A0A6J1BV69 peamaclein-like6.8e-3071.59Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPG---FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLLT LLLL+ F++LS+ A G   FC WKC+ RC+KAGV+DRC+KYCGICC KC CVPSGTYGNKHECPCY  +KNSK   KCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPG---FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

A0A6J1HDT0 peamaclein-like5.4e-3580Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

A0A6J1K7T2 peamaclein-like1.7e-3378.82Show/hide
Query:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        MKFLHLL+ +L+LTSFL+LSL APGFC  KC  RC+KAGV++RC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein1.5e-2171.19Show/hide
Query:  CGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        C  +C RRCSKA   DRC+KYCGICC KC CVP GTYGN+  CPCY NLKNSKG  KCP
Subjt:  CGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

O80641 Gibberellin-regulated protein 81.3e-2262.67Show/hide
Query:  LLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        LLLTS   +   A   CG KC  RCSKAG  + C+KYC ICC KC CVPSGT+G+K ECPCY ++KNSKG SKCP
Subjt:  LLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

P86888 Peamaclein4.6e-2376.67Show/hide
Query:  FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        FC  KC  RCSKAG ++RC+KYCGICC KC CVPSGTYGNK ECPCY +LKNSKGN KCP
Subjt:  FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

Q8LFM2 Gibberellin-regulated protein 102.3e-2262.96Show/hide
Query:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCG-CVPSGTYGNKHECPCYGNLKNSKGNSKCP
        L+  LL+ +S   LS      CG KC  RCSKAG +DRC+KYC ICC KC  CVPSGTYGNK ECPCY ++KNSKG SKCP
Subjt:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCG-CVPSGTYGNKHECPCYGNLKNSKGNSKCP

Q948Z4 Snakin-11.7e-2562.5Show/hide
Query:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        LL  L++  S ++ ++    FC  KC+ RCSKAG+ DRC+KYCGICC +C CVPSGTYGNKHECPCY + KNSKG SKCP
Subjt:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein3.4e-2161.04Show/hide
Query:  LLLLTSFLELSLGAPGFCGWKCRRRCSKAG-VRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        LLL +SF  LS      CG KC  RCSKA    + C++ C ICC KC CVPSGTYGNK ECPCY ++KNSKG SKCP
Subjt:  LLLLTSFLELSLGAPGFCGWKCRRRCSKAG-VRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

AT1G10588.2 Gibberellin-regulated family protein7.5e-2162.34Show/hide
Query:  LLLLTSFLELSLGAPGFCGWKCRRRCSKAG-VRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        LLL +SF  LS  A   CG KC  RCSKA    + C++ C ICC KC CVPSGTYGNK ECPCY ++KNSKG SKCP
Subjt:  LLLLTSFLELSLGAPGFCGWKCRRRCSKAG-VRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

AT2G14900.1 Gibberellin-regulated family protein2.0e-2166.67Show/hide
Query:  FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        +CG KC  RC +AG++DRC+KYCGICC  C CVPSGTYGNKHEC CY +  +SKG  KCP
Subjt:  FCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

AT2G39540.1 Gibberellin-regulated family protein9.4e-2462.67Show/hide
Query:  LLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP
        LLLTS   +   A   CG KC  RCSKAG  + C+KYC ICC KC CVPSGT+G+K ECPCY ++KNSKG SKCP
Subjt:  LLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP

AT5G59845.1 Gibberellin-regulated family protein1.6e-2362.96Show/hide
Query:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCG-CVPSGTYGNKHECPCYGNLKNSKGNSKCP
        L+  LL+ +S   LS      CG KC  RCSKAG +DRC+KYC ICC KC  CVPSGTYGNK ECPCY ++KNSKG SKCP
Subjt:  LLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCG-CVPSGTYGNKHECPCYGNLKNSKGNSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCCTTCATCTTCTTACTTGGCTTCTCCTTCTCACCTCCTTCCTGGAGCTCTCATTGGGTGCCCCAGGTTTTTGCGGTTGGAAATGTAGAAGGAGATGTTCCAA
AGCTGGGGTAAGAGATCGGTGCATGAAGTACTGTGGGATATGCTGTGTGAAATGTGGGTGTGTGCCTTCCGGGACTTATGGGAACAAACATGAATGCCCTTGCTATGGGA
ACTTGAAGAACTCCAAGGGCAATTCCAAGTGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAATATCCCACACTACAATTTTCTCTTCATGTGCCTTAGCTTGTTGTTAACTTAGTTTGTTGTTCCTCAAGAAAATGAAGTTCCTTCATCTTCTTACTTGGCTTCTCCT
TCTCACCTCCTTCCTGGAGCTCTCATTGGGTGCCCCAGGTTTTTGCGGTTGGAAATGTAGAAGGAGATGTTCCAAAGCTGGGGTAAGAGATCGGTGCATGAAGTACTGTG
GGATATGCTGTGTGAAATGTGGGTGTGTGCCTTCCGGGACTTATGGGAACAAACATGAATGCCCTTGCTATGGGAACTTGAAGAACTCCAAGGGCAATTCCAAGTGTCCT
TAATTATATTAAACCCTAAACCCTTTACTTTATTGCCTTTTCCCAACCTATGTGTGTTCTTCTATATGGACCCTTCTTACTTCAACTAAATGAAAAATATCTACGTCTCC
CCGAATATATATCTAAATTTACATCATAATTCATCATGTGGTAAATTTAATTATCTTTGTACGAATTATAAAAAAGTGAAAATGCAATATCGTTATCACTCCACCAGAAT
GCAAAAATGAAGAATAAGTATGGGAG
Protein sequenceShow/hide protein sequence
MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP