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IVF0020920 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020920
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:10782409..10782645
RNA-Seq ExpressionIVF0020920
SyntenyIVF0020920
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033072.1 gamma-aminobutyrate transaminase POP2 [Cucumis melo var. makuwa]1.84e-41100Show/hide
Query:  MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS
        MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS
Subjt:  MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS

KAA0033551.1 retrotransposon protein [Cucumis melo var. makuwa]1.50e-3185.71Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRK SMQQFETYDLI ECMEAATDQL+TIAEWPEK MS EDAMA QVIEL+EAIPNLTMA+KSKC+M+VN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]1.12e-2981.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRK SMQQFETYDLI ECMEAATDQL+TIAEWP+KAMS ED MA QVIEL++AI NLTMA+KSKC+M+VN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

KAA0064184.1 retrotransposon protein [Cucumis melo var. makuwa]4.65e-2881.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRKR MQQ ETYDLI +CME ATDQL+TI EWPEKAMSRED M VQVIEL E+IPNLT+A+KSKCIMIVN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

TYK02844.1 retrotransposon protein [Cucumis melo var. makuwa]4.36e-2981.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRKR MQQ ETYDLI +CME ATDQL+TI EWPEKAMSRED M VQVIEL E+IPNLT+A+KSKCIMIVN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

TrEMBL top hitse value%identityAlignment
A0A5A7SPG4 Gamma-aminobutyrate transaminase POP29.7e-31100Show/hide
Query:  MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS
        MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS
Subjt:  MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKS

A0A5A7TYU4 Retrotransposon protein1.7e-2281.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRK SMQQFETYDLI ECMEAATDQL+TIAEWP+KAMS ED MA QVIEL++AI NLTMA+KSKC+M+VN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

A0A5A7VAC3 Retrotransposon protein2.8e-2281.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRKR MQQ ETYDLI +CME ATDQL+TI EWPEKAMSRED M VQVIEL E+IPNLT+A+KSKCIMIVN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

A0A5D3B9T0 Retrotransposon protein3.9e-2485.71Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRK SMQQFETYDLI ECMEAATDQL+TIAEWPEK MS EDAMA QVIEL+EAIPNLTMA+KSKC+M+VN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

A0A5D3BUJ4 Retrotransposon protein2.8e-2281.43Show/hide
Query:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN
        KRKR MQQ ETYDLI +CME ATDQL+TI EWPEKAMSRED M VQVIEL E+IPNLT+A+KSKCIMIVN
Subjt:  KRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGACATGCTTTAGTGGACAAAAGGAAGCGCTCCATGCAGCAGTTTGAGACGTATGACCTGATTTGCGAATGTATGGAGGCTGCGACTGATCAACTGAAAACCAT
TGCAGAATGGCCGGAGAAAGCTATGAGCCGGGAGGACGCAATGGCAGTGCAGGTGATTGAGCTTATGGAGGCCATCCCAAACCTTACTATGGCGAAGAAGAGTAAGTGCA
TTATGATAGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGACATGCTTTAGTGGACAAAAGGAAGCGCTCCATGCAGCAGTTTGAGACGTATGACCTGATTTGCGAATGTATGGAGGCTGCGACTGATCAACTGAAAACCAT
TGCAGAATGGCCGGAGAAAGCTATGAGCCGGGAGGACGCAATGGCAGTGCAGGTGATTGAGCTTATGGAGGCCATCCCAAACCTTACTATGGCGAAGAAGAGTAAGTGCA
TTATGATAGTGAATTAG
Protein sequenceShow/hide protein sequence
MVGHALVDKRKRSMQQFETYDLICECMEAATDQLKTIAEWPEKAMSREDAMAVQVIELMEAIPNLTMAKKSKCIMIVN