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IVF0020924 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020924
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr10:14658355..14658633
RNA-Seq ExpressionIVF0020924
SyntenyIVF0020924
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035002.1 polyprotein [Cucumis melo var. makuwa]1.49e-2356.82Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE
        M+LIKD+DCTI Y+  K NV+AD LSRKS    + GR+ALL++LR +K  +++G+ G+ +ARFQVKP +EEEIVR Q EDP LR++ E
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE

KAA0036590.1 polyprotein [Cucumis melo var. makuwa]9.85e-2764.77Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE
        MKLIKDY  TIAY+ +K NV+AD  SRKSL+  N+G +ALL++LRGFK +LNAG   N MAR QVK T EEEIVR Q +DPE RK+AE
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]1.32e-2572.46Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTL
        MKLIKDYDCTI Y+  K N+IADALS K  SPRN+GRMALL++L+GFK +L A T GN MARFQVKPTL
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTL

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]2.52e-2663.64Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE
        M+LIKDYDCTI Y+  K NV ADALSRKS S  NKG++ALL +LR  K +LNA   GN +ARFQ K TLE+EI + QPEDP LRK+ E
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAE

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]9.81e-57100Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM
        MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM

TrEMBL top hitse value%identityAlignment
A0A5A7SUU4 Polyprotein1.0e-1856.18Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK
        M+LIKD+DCTI Y+  K NV+AD LSRKS    + GR+ALL++LR +K  +++G+ G+ +ARFQVKP +EEEIVR Q EDP LR++ E+
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK

A0A5A7SZR3 Polyprotein5.3e-2064.04Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK
        MKLIKDY  TIAY+ +K NV+AD  SRKSL+  N+G +ALL++LRGFK +LNAG   N MAR QVK T EEEIVR Q +DPE RK+AE+
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK

A0A5A7UWA6 CCHC-type integrase2.9e-1872.46Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTL
        MKLIKDYDCTI Y+  K N+IADALS K  SPRN+GRMALL++L+GFK +L A T GN MARFQVKPTL
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTL

A0A5A7VIK8 Polyprotein1.7e-42100Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM
        MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM

A0A5D3DMM3 CCHC-type integrase4.1e-2062.92Show/hide
Query:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK
        M+LIKDYDCTI Y+  K NV ADALSRKS S  NKG++ALL +LR  K +LNA   GN +ARFQ K TLE+EI + QPEDP LRK+ E+
Subjt:  MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCATTAAAGATTATGATTGCACTATCGCATACTACCCTAGGAAAGTCAATGTCATAGCTGACGCATTAAGTAGAAAAAGCCTCAGCCCAAGGAACAAAGGGAG
GATGGCTCTATTAAAAAAGCTAAGAGGCTTCAAAGTGGTACTAAATGCAGGAACATTTGGAAACCCGATGGCACGTTTTCAGGTGAAGCCCACGCTTGAAGAGGAAATTG
TTAGATTGCAACCTGAAGACCCTGAGCTGAGGAAGATAGCCGAAAAAAGAGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCATTAAAGATTATGATTGCACTATCGCATACTACCCTAGGAAAGTCAATGTCATAGCTGACGCATTAAGTAGAAAAAGCCTCAGCCCAAGGAACAAAGGGAG
GATGGCTCTATTAAAAAAGCTAAGAGGCTTCAAAGTGGTACTAAATGCAGGAACATTTGGAAACCCGATGGCACGTTTTCAGGTGAAGCCCACGCTTGAAGAGGAAATTG
TTAGATTGCAACCTGAAGACCCTGAGCTGAGGAAGATAGCCGAAAAAAGAGAGATGTGA
Protein sequenceShow/hide protein sequence
MKLIKDYDCTIAYYPRKVNVIADALSRKSLSPRNKGRMALLKKLRGFKVVLNAGTFGNPMARFQVKPTLEEEIVRLQPEDPELRKIAEKREM