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IVF0020961 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020961
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr03:13544923..13545162
RNA-Seq ExpressionIVF0020961
SyntenyIVF0020961
Gene Ontology termsNA
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043066.1 pol protein [Cucumis melo var. makuwa]6.71e-4996.2Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMR RYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

KAA0053161.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.77e-4898.72Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE

KAA0053367.1 pol protein [Cucumis melo var. makuwa]1.51e-4898.72Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE

KAA0054732.1 pol protein [Cucumis melo var. makuwa]1.51e-4898.72Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFE

KAA0059750.1 pol protein [Cucumis melo var. makuwa]1.55e-4894.94Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQP+EVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYP+LFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

TrEMBL top hitse value%identityAlignment
A0A5A7SSB3 Pol protein1.6e-3697.47Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW+NHRVEEATWER+DDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

A0A5A7T8G8 Reverse transcriptase5.4e-3798.73Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

A0A5A7TGX4 Reverse transcriptase2.0e-3697.47Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

A0A5A7UDB1 Reverse transcriptase2.0e-3697.47Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLR+KEIPLVKVLWRNHRVEEATWER+DDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

A0A5A7UZZ4 Pol protein1.6e-3694.94Show/hide
Query:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG
        MLRKYVPDPSHVVDYEPLEIDEN+SYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWER+DDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAGGCTACATGGGAGCGACAAGATGACATGAGGTCTCGTTATC
CCGAGCTGTTCGAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAGGCTACATGGGAGCGACAAGATGACATGAGGTCTCGTTATC
CCGAGCTGTTCGAGGGGTAA
Protein sequenceShow/hide protein sequence
MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWERQDDMRSRYPELFEG