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IVF0020967 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020967
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationchr05:159129..159296
RNA-Seq ExpressionIVF0020967
SyntenyIVF0020967
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570311.1 hypothetical protein SDJN03_29226, partial [Cucurbita argyrosperma subsp. sororia]1.06e-1581.36Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKLFLV+LL+AFAAT AQPAAP    APAPASDAPLF PTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
KAG6605834.1 Arabinogalactan protein 14, partial [Cucurbita argyrosperma subsp. sororia]1.50e-0970Show/hide
Query:  MEAIKLKLFLVLLLL-AFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
        MEA+KLKLFLVLL+L AFA T AQ AAP    APAPASDAPL Y +F ASLS L F++FL
Subjt:  MEAIKLKLFLVLLLL-AFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
XP_022944304.1 arabinogalactan peptide 13-like [Cucurbita moschata]5.55e-1883.05Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKLFLV+LL+AFAAT AQPAAP    APAPASDAPLFYPTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPAAP----APAPASDAPLFYPTFLASLSALFFSFFL
XP_023513159.1 arabinogalactan peptide 14-like [Cucurbita pepo subsp. pepo]2.16e-1784.21Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPAAP--APAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKL LV+LL+AFAAT AQPAAP  APAPASDAPLFYPTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPAAP--APAPASDAPLFYPTFLASLSALFFSFFL
XP_038902540.1 arabinogalactan protein 13-like [Benincasa hispida]4.40e-1579.66Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKLFLVLLL+AFA T AQ A    APAPAPASDA LFYPTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
TrEMBL top hitse value%identityAlignment
A0A438JV44 Arabinogalactan peptide 146.4e-0557.63Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
        MEA+K+KLFL ++++  A +  QPA    APAPAPASDA +F PTF ASL+AL F F L
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
A0A6J1FWG8 arabinogalactan peptide 13-like8.4e-1383.05Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKLFLV+LL+AFAAT AQPA    APAPAPASDAPLFYPTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
A0A6J1J5K6 arabinogalactan peptide 13-like8.4e-1383.05Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
        MEAIKLKLFLV+LL+AFAAT AQPA    APAPAPASDAPLFYPTF ASLSAL F+FFL
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
F6GUN4 Uncharacterized protein6.4e-0557.63Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
        MEA+K+KLFL ++++  A +  QPA    APAPAPASDA +F PTF ASL+AL F F L
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSFFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26320.1 arabinogalactan protein 133.1e-0447.37Show/hide
Query:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSF
        MEA+K++LF+ +L+ A A +  Q A    APAP+P SDA L  P F AS++ L F F
Subjt:  MEAIKLKLFLVLLLLAFAATNAQPA----APAPAPASDAPLFYPTFLASLSALFFSF
AT5G56540.1 arabinogalactan protein 141.4e-0447.46Show/hide
Query:  MEAIKLKLFLVLLLLAFA-----ATNAQPAAPAPAPASDAPLFYPTFLASLSALFFSFF
        MEA+K+KL++V+L+   A      T A   APAP+P SDA  F PTF AS++ + F FF
Subjt:  MEAIKLKLFLVLLLLAFA-----ATNAQPAAPAPAPASDAPLFYPTFLASLSALFFSFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAATCAAGTTGAAGCTGTTCCTGGTGCTGCTGCTGCTGGCCTTCGCTGCCACCAATGCCCAGCCTGCTGCTCCTGCTCCTGCTCCTGCCTCTGATGCTCCTCT
CTTTTATCCTACTTTCCTTGCTTCTCTTTCTGCTCTTTTTTTTTCCTTCTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAATCAAGTTGAAGCTGTTCCTGGTGCTGCTGCTGCTGGCCTTCGCTGCCACCAATGCCCAGCCTGCTGCTCCTGCTCCTGCTCCTGCCTCTGATGCTCCTCT
CTTTTATCCTACTTTCCTTGCTTCTCTTTCTGCTCTTTTTTTTTCCTTCTTCCTTTAA
Protein sequenceShow/hide protein sequence
MEAIKLKLFLVLLLLAFAATNAQPAAPAPAPASDAPLFYPTFLASLSALFFSFFL