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IVF0020989 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020989
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:13156125..13156316
RNA-Seq ExpressionIVF0020989
SyntenyIVF0020989
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045334.1 hypothetical protein E6C27_scaffold316G001090 [Cucumis melo var. makuwa]1.52e-1776Show/hide
Query:  VEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK
        VEKL LKYL TLARYPQ DMVGG+CNLV LN   TLHQN+EEE HQK Q+
Subjt:  VEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK

KAA0054399.1 hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa]1.56e-1766.67Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK
        M++ K + PFP+TVEKLCLKYLPTLA+YPQI M  GR NL  L+ I +LHQN+EEE  QKTQK
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK

KAA0060350.1 hypothetical protein E6C27_scaffold22G001410 [Cucumis melo var. makuwa]4.82e-1965.57Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKT
        M + +G KPFPTT+EKLC KYLPTLARYP+I+M GGR NL  LN + TLH N+EEE  Q T
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKT

KAA0063168.1 hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]7.41e-1964.52Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQ
        MRN KG K FPT  +K C KYL TLARYPQ DMVGG+CN+  LN I TL+QN+EEEC  K +
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQ

KGN57724.1 hypothetical protein Csa_010778 [Cucumis sativus]3.95e-1861.9Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK
        M++ K  KPFPT VEKLC KYLPT  RYPQI+M GGR NL  LN + ++H N+E  C QKTQK
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK

TrEMBL top hitse value%identityAlignment
A0A0A0L9R5 Uncharacterized protein4.8e-1261.9Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK
        M++ K  KPFPT VEKLC KYLPT  RYPQI+M GGR NL  LN + ++H N+E  C QKTQK
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK

A0A5A7ULS0 Uncharacterized protein4.3e-1366.67Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK
        M++ K + PFP+TVEKLCLKYLPTLA+YPQI M  GR NL  L+ I +LHQN+EEE  QKTQK
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK

A0A5A7V0F9 Uncharacterized protein2.8e-1279.59Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITL
        MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVG   N V  N  + L
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITL

A0A5A7V6C0 Uncharacterized protein3.9e-1464.52Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQ
        MRN KG K FPT  +K C KYL TLARYPQ DMVGG+CN+  LN I TL+QN+EEEC  K +
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQ

A0A5D3DFD3 Uncharacterized protein7.3e-1365.57Show/hide
Query:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKT
        M + +G KPFPTT+EKLC KYLPTLARYP+I+M GGR NL  LN + TLH N+EEE  Q T
Subjt:  MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACCTCAAAGGCATCAAACCTTTCCCAACAACGGTGGAGAAGTTGTGTCTGAAGTACTTGCCTACCCTTGCGAGATACCCACAGATTGATATGGTGGGAGGTAG
GTGTAATTTGGTGGAACTCAACTGTATAATAACCCTCCATCAAAATGAGGAGGAAGAATGCCACCAGAAGACACAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACCTCAAAGGCATCAAACCTTTCCCAACAACGGTGGAGAAGTTGTGTCTGAAGTACTTGCCTACCCTTGCGAGATACCCACAGATTGATATGGTGGGAGGTAG
GTGTAATTTGGTGGAACTCAACTGTATAATAACCCTCCATCAAAATGAGGAGGAAGAATGCCACCAGAAGACACAAAAATAG
Protein sequenceShow/hide protein sequence
MRNLKGIKPFPTTVEKLCLKYLPTLARYPQIDMVGGRCNLVELNCIITLHQNEEEECHQKTQK