; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0020992 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0020992
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L5, chloroplastic
Genome locationtig00000267:149062..151257
RNA-Seq ExpressionIVF0020992
SyntenyIVF0020992
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR020929 - Ribosomal protein L5, conserved site
IPR020930 - Ribosomal protein L5, bacterial-type
IPR022803 - Ribosomal protein L5 domain superfamily
IPR031309 - Ribosomal protein L5, C-terminal
IPR031310 - Ribosomal protein L5, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17619.1 50S ribosomal protein L5 [Cucumis melo var. makuwa]3.35e-185100Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

XP_004133849.1 50S ribosomal protein L5, chloroplastic [Cucumis sativus]2.53e-18096.68Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRF+APVGCGNPSNVAQL +RVKALAS GGAIVLVEKAEAEKVNRLKSNY+EKIVPLLMDEFSY NIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AA+NELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES GAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

XP_008438004.1 PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo]4.57e-18399.26Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRF+APVG GNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

XP_022147519.1 50S ribosomal protein L5, chloroplastic [Momordica charantia]2.47e-16690.04Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MA+SSLLSS+ SSFHGH P FSVRF AP  CGNPSNVA LAVRVKA  +AG +IVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFRES+G+A +MRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

XP_038878175.1 50S ribosomal protein L5, chloroplastic [Benincasa hispida]2.41e-17392.99Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RF+AP+ CGNPSN+A LAVRVKA  S GGAIVLV+KAEAEKVNRLKSNY+EKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIA TLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES G+ AVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

TrEMBL top hitse value%identityAlignment
A0A1S3AVB4 50S ribosomal protein L5, chloroplastic4.2e-14299.26Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRF+APVG GNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

A0A5A7U637 50S ribosomal protein L5, chloroplastic4.2e-14299.26Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRF+APVG GNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

A0A5D3D3L2 50S ribosomal protein L5, chloroplastic1.0e-143100Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

A0A6J1D186 50S ribosomal protein L5, chloroplastic3.2e-12990.04Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MA+SSLLSS+ SSFHGH P FSVRF AP  CGNPSNVA LAVRVK  A+AG +IVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFRES+G+A +MRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

A0A6J1ECQ6 50S ribosomal protein L5, chloroplastic3.9e-12789.67Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MASSS+LSS+ SSFHGHSP  S RF AP   G PS VA L+VRVK  AS GGAIVLVEKAEAEKVNRLKSNY+EKIVP+LMDEFSYSNIHQVPKIEKIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIGIREQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAA+ +RKKKLKSHHFDSKSKGR+RR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR

SwissProt top hitse value%identityAlignment
B8HMR6 50S ribosomal protein L51.0e-6062.15Show/hide
Query:  RLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLK+ Y+E  VP LM++F Y NIHQVPK+ KI +N G+G+A QNAK L+A++NE+A I GQ+PV TRAKK+IA FKIR+G P+GI  TLR + MY+F DR
Subjt:  RLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRE
        LINL LPR RDF+G+N  SFDG GNYS+G+REQ +FPEI +D++ + RGMDV I TTA TD+E + LL +MGMPFR+
Subjt:  LINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRE

O04603 50S ribosomal protein L5, chloroplastic2.3e-9266.3Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MAS SLL SS SSFHG       RFS P+   + + +    +R     SA G  VLVEK+EAEK  RLK+ Y+E+I+P L +EF Y NIHQVPK++KIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDA QN KGL+AAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ SSFDG+GNYSIG+++Q 
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAA--AVMRKKKLKSHHFDSKSKGR
        VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMPFRE  G +  A++RKKKLKSHHFD+K KG+
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAA--AVMRKKKLKSHHFDSKSKGR

P82192 50S ribosomal protein L5, chloroplastic1.2e-9368.28Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MAS+SLL S++SSF G      VRF           ++   V+     +A G  V V+KAEAE +NRLK+NYIEK+VPLL +EFSYSNI +VPK+ KIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDA QNAKGLDAA+NELA ITGQRPVKT+AK SIA FK+REG  LGIA TLRGN+MYSFLDRLINL LPRTRDFQG+N +SFDGHGNYS+G REQS
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGR
        VFPEIK + +GK RGMDVCITTTA+TD+EA +LL+LMGMPFRE +G + ++RKKKLKSHHFD+K KGR
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGR

Q8DMM0 50S ribosomal protein L52.3e-6061.8Show/hide
Query:  RLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLK +Y + +VP LM +F Y NIHQVPKI K+ VN G+G+A QNAK L+A + E+A+ITGQ+PV TRAKK+IA FKIR+G P+G+A TLR   MY+FLDR
Subjt:  RLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES
        LINL LPR RDF+G+N  SFDG GNY++G+REQ +FPE+ +D + + RGMDV I TTA TD+E + LL  MGMPFRE+
Subjt:  LINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRES

Q9ZST0 50S ribosomal protein L5, chloroplastic9.3e-7865.12Show/hide
Query:  IVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA
        IVLV+  EA+KV+RLK+ Y +K+VPL+ +EF Y+N+HQVPK+EKIVVNCG+G    N+KGL++AM +LA ITGQ PVKT+AKKS+A+FKIREG  +GIA 
Subjt:  IVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA

Query:  TLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRK
        TLRG VM++FLDRLINLGLPRT DF G+N +SFDGHGN++IG+R+Q VFPEI ++  GK  GMDVCI TTA+TD EA RLL L+GMPF E   ++ V+RK
Subjt:  TLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAAAVMRK

Query:  KKLKSHHFDSKSKGR
        K+LK HHF SK +GR
Subjt:  KKLKSHHFDSKSKGR

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A2.2e-0526.81Show/hide
Query:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ
        +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++
Subjt:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ

Query:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD
         L   +F   G +  GI+E  +   IK+D      GMD
Subjt:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD

AT3G58700.1 Ribosomal L5P family protein2.2e-0526.81Show/hide
Query:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ
        +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++
Subjt:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ

Query:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD
         L   +F   G +  GI+E  +   IK+D      GMD
Subjt:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD

AT4G01310.1 Ribosomal L5P family protein1.6e-9366.3Show/hide
Query:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV
        MAS SLL SS SSFHG       RFS P+   + + +    +R     SA G  VLVEK+EAEK  RLK+ Y+E+I+P L +EF Y NIHQVPK++KIVV
Subjt:  MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS
        NCGIGDA QN KGL+AAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ SSFDG+GNYSIG+++Q 
Subjt:  NCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQS

Query:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAA--AVMRKKKLKSHHFDSKSKGR
        VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMPFRE  G +  A++RKKKLKSHHFD+K KG+
Subjt:  VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGAA--AVMRKKKLKSHHFDSKSKGR

AT4G18730.1 ribosomal protein L16B2.2e-0526.81Show/hide
Query:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ
        +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++
Subjt:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ

Query:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD
         L   +F   G +  GI+E  +   IK+D      GMD
Subjt:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD

AT5G45775.2 Ribosomal L5P family protein2.2e-0526.81Show/hide
Query:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ
        +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++
Subjt:  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQ

Query:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD
         L   +F   G +  GI+E  +   IK+D      GMD
Subjt:  GLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTCTTCACTGTTGAGCTCCTCTACGTCGTCGTTTCATGGCCATTCCCCGTTCTTCTCCGTCCGTTTTTCTGCCCCGGTTGGCTGCGGAAACCCTAGCAATGT
AGCTCAATTGGCGGTGAGAGTTAAAGCATTGGCTAGTGCCGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCCGAGAAGGTCAACCGGCTTAAATCCAATTACATTG
AGAAAATCGTGCCGTTGCTTATGGACGAGTTCTCCTACTCTAATATCCACCAGGTCCCCAAAATTGAGAAGATAGTGGTGAATTGTGGTATTGGAGATGCCCAGCAGAAT
GCGAAGGGTTTGGATGCTGCAATGAATGAATTGGCATCCATTACCGGGCAACGACCTGTGAAAACACGTGCAAAGAAGTCCATTGCCACCTTCAAGATCAGGGAGGGTCA
ACCACTTGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCTTTCCTGGATCGTCTGATCAACTTGGGGCTGCCCAGAACAAGGGACTTTCAGGGACTGAACTCAA
GTAGCTTTGATGGGCATGGAAATTACTCCATCGGTATCCGTGAACAGAGTGTGTTCCCAGAAATAAAGTTCGACACACTTGGCAAACCGAGGGGGATGGATGTTTGTATC
ACAACAACAGCTGAAACCGATCAAGAAGCTCAGCGACTCCTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTGCTGGTGCCGCAGCTGTGATGCGGAAAAAGAAGCTAAA
GTCCCACCATTTTGACTCCAAATCCAAGGGAAGAGCTCGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTTCTTCACTGTTGAGCTCCTCTACGTCGTCGTTTCATGGCCATTCCCCGTTCTTCTCCGTCCGTTTTTCTGCCCCGGTTGGCTGCGGAAACCCTAGCAATGT
AGCTCAATTGGCGGTGAGAGTTAAAGCATTGGCTAGTGCCGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCCGAGAAGGTCAACCGGCTTAAATCCAATTACATTG
AGAAAATCGTGCCGTTGCTTATGGACGAGTTCTCCTACTCTAATATCCACCAGGTCCCCAAAATTGAGAAGATAGTGGTGAATTGTGGTATTGGAGATGCCCAGCAGAAT
GCGAAGGGTTTGGATGCTGCAATGAATGAATTGGCATCCATTACCGGGCAACGACCTGTGAAAACACGTGCAAAGAAGTCCATTGCCACCTTCAAGATCAGGGAGGGTCA
ACCACTTGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCTTTCCTGGATCGTCTGATCAACTTGGGGCTGCCCAGAACAAGGGACTTTCAGGGACTGAACTCAA
GTAGCTTTGATGGGCATGGAAATTACTCCATCGGTATCCGTGAACAGAGTGTGTTCCCAGAAATAAAGTTCGACACACTTGGCAAACCGAGGGGGATGGATGTTTGTATC
ACAACAACAGCTGAAACCGATCAAGAAGCTCAGCGACTCCTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTGCTGGTGCCGCAGCTGTGATGCGGAAAAAGAAGCTAAA
GTCCCACCATTTTGACTCCAAATCCAAGGGAAGAGCTCGGAGGTAA
Protein sequenceShow/hide protein sequence
MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQN
AKGLDAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCI
TTTAETDQEAQRLLALMGMPFRESAGAAAVMRKKKLKSHHFDSKSKGRARR