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IVF0021003 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021003
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr10:7795142..7795396
RNA-Seq ExpressionIVF0021003
SyntenyIVF0021003
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]6.46e-3685.37Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND+VQAV QDVEGLKDQLA ILELLTT RGKSV GTSSQVEVDLN VLEDMPA P GFTPQRSSSP M D  YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

KAA0048197.1 uncharacterized protein E6C27_scaffold63G001080 [Cucumis melo var. makuwa]1.08e-3680.49Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND+V+AV QDVEGLKD LA IL+LLT  RGKSV G+SSQVEVD+NHVLEDMPA PLGFT QRSSSPCMVD+ YPT F
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

KAA0056366.1 uncharacterized protein E6C27_scaffold186G001020 [Cucumis melo var. makuwa]4.23e-4085.37Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND++QAV QDVEGLKDQLA ILE LTT RGKSVTGTSSQVEVDLN VLEDMPA P GFTPQRSS PCM+DR YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

TYK09459.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.70e-3680.95Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT
        MDE+TND+VQAVHQDVEGLKDQL  ILELLTT RGKS+  TSSQVE+DL  VLEDMPA P GFTPQRSSSP MVDR YPTSF T
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT

TYK15864.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.84e-3584.15Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND+VQAV QDVEGLKDQLA ILELLTT RGKSV G SSQVEVDLN VLEDMP  P GF PQRSSSP MVDR YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

TrEMBL top hitse value%identityAlignment
A0A5A7UGP0 Uncharacterized protein1.3e-2885.37Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND+VQAV QDVEGLKDQLA ILELLTT RGKSV G SSQVEVDLN VLEDMPA PLGF PQRSSSP MVD+ YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

A0A5A7UPX8 Uncharacterized protein3.0e-3085.37Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND++QAV QDVEGLKDQLA ILE LTT RGKSVTGTSSQVEVDLN VLEDMPA P GFTPQRSS PCM+DR YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

A0A5A7V681 Retrotrans_gag domain-containing protein2.6e-2985.71Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT
        MDEQTND+VQAV QDVEGLKDQLA ILELLTT RGKSV GTSSQVEVDLN VLEDMPA P GFTPQRSSSP M DR YPTSF T
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT

A0A5A7VAU5 Uncharacterized protein1.3e-2885.37Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF
        MDEQTND+VQAV QDVEGLKDQLA ILELLTT RGKSV GTSSQVEVDLN VLEDMP  P GFTPQRSSSP M DR YPTSF
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSF

A0A5D3CGN1 Gag-pro-like protein3.7e-2880.95Show/hide
Query:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT
        MDE+TND+VQAVHQDVEGLKDQL  ILELLTT RGKS+  TSSQVE+DL  VLEDMPA P GFTPQRSSSP MVDR YPTSF T
Subjt:  MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGCAAACCAATGATAAGGTTCAAGCAGTTCATCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAATATCCTGGAATTGCTCACTACTGCAAGAGGAAAGAG
TGTTACGGGGACTTCATCACAAGTGGAAGTAGATCTGAACCATGTACTAGAGGACATGCCTGCAAACCCTCTGGGTTTTACTCCTCAAAGGTCGTCTAGTCCATGCATGG
TGGATAGGATATATCCTACATCCTTTACCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGCAAACCAATGATAAGGTTCAAGCAGTTCATCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAATATCCTGGAATTGCTCACTACTGCAAGAGGAAAGAG
TGTTACGGGGACTTCATCACAAGTGGAAGTAGATCTGAACCATGTACTAGAGGACATGCCTGCAAACCCTCTGGGTTTTACTCCTCAAAGGTCGTCTAGTCCATGCATGG
TGGATAGGATATATCCTACATCCTTTACCACATAA
Protein sequenceShow/hide protein sequence
MDEQTNDKVQAVHQDVEGLKDQLANILELLTTARGKSVTGTSSQVEVDLNHVLEDMPANPLGFTPQRSSSPCMVDRIYPTSFTT