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IVF0021036 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021036
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent helicase ATRX
Genome locationchr05:15288454..15288681
RNA-Seq ExpressionIVF0021036
SyntenyIVF0021036
Gene Ontology termsGO:0000781 - chromosome, telomeric region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR038718 - SNF2-like, N-terminal domain superfamily
IPR044574 - ATPase ARIP4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8401988.1 hypothetical protein HHK36_012939 [Tetracentron sinense]1.10e-1969.7Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSS-SCHRPLFIYMKGGSLISPL
        QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV     S  R + + +K   +++P+
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSS-SCHRPLFIYMKGGSLISPL
KAG2693963.1 hypothetical protein I3760_08G119200 [Carya illinoinensis]9.63e-1990.91Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
        Q+SGIRFMWENII+SIRKVKSGDKGLGCILAHTMGLGKTFQV++
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
KAG6700572.1 hypothetical protein I3842_08G118800 [Carya illinoinensis]9.63e-1990.91Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
        Q+SGIRFMWENII+SIRKVKSGDKGLGCILAHTMGLGKTFQV++
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
KAG7967741.1 hypothetical protein I3843_08G114500 [Carya illinoinensis]9.63e-1990.91Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
        Q+SGIRFMWENII+SIRKVKSGDKGLGCILAHTMGLGKTFQV++
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFV
XP_007143955.1 hypothetical protein PHAVU_007G116600g [Phaseolus vulgaris]9.72e-19100Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
TrEMBL top hitse value%identityAlignment
A0A0A0LH69 Uncharacterized protein1.3e-3296Show/hide
Query:  MVFLLQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSSSCHRPLFIYMKGGSLISPLCKEDK
        MVFLLQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVS SC+RPLFIYMKGGSLISPL KEDK
Subjt:  MVFLLQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSSSCHRPLFIYMKGGSLISPLCKEDK
A0A1S3B4Z9 ATP-dependent helicase ATRX4.2e-15100Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
A0A1S3B502 ATP-dependent helicase ATRX4.2e-15100Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
A0A1S3V5P5 ATP-dependent helicase ATRX4.2e-15100Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
A0A6A1URC6 ATP-dependent helicase ATRX3.2e-1586.27Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSSSCHRP
        Q+SGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ   +SS H P
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSSSCHRP
SwissProt top hitse value%identityAlignment
A4IHD2 Helicase ARIP43.7e-0859.52Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QI GIRF+++N+++S+ +  SG  G GCILAH+MGLGKT QV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
F4HW51 Protein CHROMATIN REMODELING 203.6e-1690.48Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q++GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
P46100 Transcriptional regulator ATRX1.2e-0654.76Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q+ G++FMW+   +S++K K    G GCILAH MGLGKT QV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Q99NG0 Helicase ARIP41.1e-0757.14Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QI GIRF+++N+++S+ + K+   G GCILAH+MGLGKT QV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Q9Y4B4 Helicase ARIP41.1e-0757.14Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        QI GIRF+++N+++S+ + K+   G GCILAH+MGLGKT QV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
Arabidopsis top hitse value%identityAlignment
AT1G08600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.6e-1790.48Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q++GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
AT1G08600.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.6e-1790.48Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q++GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.6e-1790.48Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q++GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
AT1G08600.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.6e-1790.48Show/hide
Query:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV
        Q++GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTFQV
Subjt:  QISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTCTGCTGCAGATTTCTGGAATAAGATTTATGTGGGAAAATATCATTCAATCGATACGGAAAGTGAAGTCTGGGGATAAAGGACTTGGATGCATTCTTGCTCA
TACAATGGGTCTTGGTAAAACTTTTCAGGTATTTGTTTCTTCGAGCTGTCATAGACCCTTGTTTATTTATATGAAAGGTGGTTCTTTGATTTCCCCCCTCTGTAAAGAAG
ATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTCTGCTGCAGATTTCTGGAATAAGATTTATGTGGGAAAATATCATTCAATCGATACGGAAAGTGAAGTCTGGGGATAAAGGACTTGGATGCATTCTTGCTCA
TACAATGGGTCTTGGTAAAACTTTTCAGGTATTTGTTTCTTCGAGCTGTCATAGACCCTTGTTTATTTATATGAAAGGTGGTTCTTTGATTTCCCCCCTCTGTAAAGAAG
ATAAATAA
Protein sequenceShow/hide protein sequence
MVFLLQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVFVSSSCHRPLFIYMKGGSLISPLCKEDK