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IVF0021038 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021038
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationchr08:16373732..16374101
RNA-Seq ExpressionIVF0021038
SyntenyIVF0021038
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]3.82e-1661.54Show/hide
Query:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC
        A KRC + LY  GC+L+DCGKKCWEKHH   ++CI  N +QT YACYC F+C
Subjt:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC

CAB4286917.1 unnamed protein product [Prunus armeniaca]6.45e-1657.69Show/hide
Query:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC
        A KRC++ LY+ GC+L DCGKKCW+KHH   H C+  N +Q  YACYC F+C
Subjt:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]1.22e-3065.79Show/hide
Query:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG
        SS  +  AL  AVA+ILV Q   A +RCQD LY+ GC+L DCG+KCWEKHH  SHQCIPT+P QTIYACYCF++CG
Subjt:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]2.31e-4189.55Show/hide
Query:  ALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN
        AL+L  QDVSAA+RCQDVLYN GC+LNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG QKN
Subjt:  ALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]6.21e-2864.47Show/hide
Query:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG
        SS  +   LI AVA+I + Q   AA RCQD+LYN GC+L DCG+KCWEKHH  S QCIPT+P QTIYACYCF+ CG
Subjt:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG

TrEMBL top hitse value%identityAlignment
A0A0A0L2R3 Uncharacterized protein6.1e-3686.59Show/hide
Query:  MASSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN
        M SS  ICFALIFAVAL+L  QDVSAA+RCQDVLYN GC+LNDCGKKCWEKHHT+SHQCIPTNPSQTIYACYCFFDCG QKN
Subjt:  MASSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN

A0A0A0LVZ5 Uncharacterized protein1.6e-2064.47Show/hide
Query:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG
        SS  +   LI AVA+I + Q   AA RCQD+LYN GC+L DCG+KCWEKHH  S QCIPT+P QTIYACYCF+ CG
Subjt:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG

A0A4Y1RT05 Uncharacterized protein1.8e-1161.54Show/hide
Query:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC
        A KRC + LY  GC+L+DCGKKCWEKHH   ++CI  N +QT YACYC F+C
Subjt:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat1.7e-2265.79Show/hide
Query:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG
        SS  +  AL  AVA+ILV Q   A +RCQD LY+ GC+L DCG+KCWEKHH  SHQCIPT+P QTIYACYCF++CG
Subjt:  SSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCG

A0A6J5VH03 Uncharacterized protein4.0e-1157.69Show/hide
Query:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC
        A KRC++ LY+ GC+L DCGKKCW+KHH   H C+  N +Q  YACYC F+C
Subjt:  AAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCCCATAATATTTGCTTTGCTCTTATATTTGCAGTTGCATTGATCTTGGTGCTTCAAGATGTCTCAGCTGCCAAAAGATGTCAAGACGTTTTGTATAATAT
TGGGTGCTCTCTCAATGACTGTGGAAAAAAATGTTGGGAGAAGCATCATACTATTTCACATCAATGCATTCCAACTAATCCTTCTCAAACGATCTATGCTTGTTATTGTT
TTTTTGATTGTGGTGATCAAAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCCCATAATATTTGCTTTGCTCTTATATTTGCAGTTGCATTGATCTTGGTGCTTCAAGATGTCTCAGCTGCCAAAAGATGTCAAGACGTTTTGTATAATAT
TGGGTGCTCTCTCAATGACTGTGGAAAAAAATGTTGGGAGAAGCATCATACTATTTCACATCAATGCATTCCAACTAATCCTTCTCAAACGATCTATGCTTGTTATTGTT
TTTTTGATTGTGGTGATCAAAAGAATTGA
Protein sequenceShow/hide protein sequence
MASSHNICFALIFAVALILVLQDVSAAKRCQDVLYNIGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN