; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0021075 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021075
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionreactive Intermediate Deaminase A, chloroplastic-like
Genome locationchr06:21572394..21598804
RNA-Seq ExpressionIVF0021075
SyntenyIVF0021075
Gene Ontology termsGO:1901565 - organonitrogen compound catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019239 - deaminase activity (molecular function)
InterPro domainsIPR006056 - RidA family
IPR006175 - YjgF/YER057c/UK114 family
IPR019897 - RidA, conserved site
IPR035959 - RutC-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152932.1 reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus]5.58e-8473.8Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+FHMPAFDVTALRSK+PLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD+VEDQTEQVLKNMGEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPARSTY+VA LPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

XP_008463412.1 PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]3.69e-8978.07Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

XP_022942433.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata]8.41e-7970.59Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+ HMPA D+TALRSKTPLAVGVGC SVAGTTL RSSSTSKRQIPFASL IST +                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD++E QTEQVLKNMGEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

XP_022976324.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]1.03e-7971.12Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+ HMPA D+TALRSKTPLAVGVGC SVAGTT  RSSSTSKRQIPFASLGIST +                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD++E QTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

XP_038903207.1 reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]1.37e-8473.8Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+FHMPAFDVTALRSKTPLAVGVGC SVAGTTLWRSSSTSKRQ+PFASLGIST +                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD+VEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSP+PARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

TrEMBL top hitse value%identityAlignment
A0A0A0L2Z6 Uncharacterized protein7.3e-6473.8Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+FHMPAFDVTALRSK+PLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD+VEDQTEQVLKNMGEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPARSTY+VA LPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

A0A1S3CJ54 reactive Intermediate Deaminase A, chloroplastic-like8.4e-6878.07Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

A0A6J1FUT7 reactive Intermediate Deaminase A, chloroplastic6.4e-6070.59Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+ HMPA D+TALRSKTPLAVGVGC SVAGTTL RSSSTSKRQIPFASL IST +                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD++E QTEQVLKNMGEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

A0A6J1IN69 reactive Intermediate Deaminase A, chloroplastic1.3e-6071.12Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+ HMPA D+TALRSKTPLAVGVGC SVAGTT  RSSSTSKRQIPFASLGIST +                                       
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSD++E QTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

A0A6P4APP4 reactive Intermediate Deaminase A, chloroplastic3.6e-5565.24Show/hide
Query:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------
        MAWCA R+F++PA DV ALR++ PLAVGVG  SVAG+ +WRSSS+ KR  PFA LGIST +R                                      
Subjt:  MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSR--------------------------------------

Query:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
          KFVSDNVEDQTEQVLKNMGEILKAGGA YSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPARSTYQVAALPLDAK+EIECIA+L
Subjt:  --KFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

SwissProt top hitse value%identityAlignment
P52758 2-iminobutanoate/2-iminopropanoate deaminase8.7e-2254.95Show/hide
Query:  LGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIA
        +G+  SS + VS  V ++ +Q LKNMGEILKA G  +++VVKTT++LAD+ DF  VNEIY +YF S  PAR+ YQVAALP  +++EIE +A
Subjt:  LGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIA

P52759 2-iminobutanoate/2-iminopropanoate deaminase4.8e-2044.44Show/hide
Query:  SKTPLAVGVGCVSV-AGTTLWRSSSTSKRQIPFASLGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP
        SK P A+G    +V    T++ S            +G+  SS + V   V ++ +Q LKN+GEILKA G  +++VVKTT++LAD+ DF  VNEIY  YF 
Subjt:  SKTPLAVGVGCVSV-AGTTLWRSSSTSKRQIPFASLGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP

Query:  SPAPARSTYQVAALPLDAKVEIECIA
           PAR+ YQVAALP  +++EIE IA
Subjt:  SPAPARSTYQVAALPLDAKVEIECIA

P52760 2-iminobutanoate/2-iminopropanoate deaminase2.8e-2053.85Show/hide
Query:  LGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIA
        +G+  SS + V   V ++ +Q LKN+GEILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  ++VEIE IA
Subjt:  LGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIA

Q10121 RutC family protein C23G10.22.8e-2046.03Show/hide
Query:  SKTPLAVGVGCVSV-AGTTLWRSSSTSKRQIPFASLGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP
        +  P A+G    +V AG T++ S           SLG+   +   + + V +QT Q LKN+GE+LKA GA Y +VVKTT++L ++ DF  VNE+YG+YF 
Subjt:  SKTPLAVGVGCVSV-AGTTLWRSSSTSKRQIPFASLGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP

Query:  SPAPARSTYQVAALPLDAKVEIECIA
        SP PAR+ YQVAALP    VEIE +A
Subjt:  SPAPARSTYQVAALPLDAKVEIECIA

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic6.9e-4356.84Show/hide
Query:  MAWCATRSFHMPAFDV-TALRS-KTPL-AVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS------------------------------------
        M W   RS + P  D+ TALRS +TPL A GVGC + AG +L+R SS   R  PFASL +S SS                                    
Subjt:  MAWCATRSFHMPAFDV-TALRS-KTPL-AVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS------------------------------------

Query:  ----RKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
             KFVS++VEDQTEQVLKNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFP+P+PARSTYQVAALPL+AK+EIECIATL
Subjt:  ----RKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL

Arabidopsis top hitse value%identityAlignment
AT3G20390.1 endoribonuclease L-PSP family protein4.9e-4456.84Show/hide
Query:  MAWCATRSFHMPAFDV-TALRS-KTPL-AVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS------------------------------------
        M W   RS + P  D+ TALRS +TPL A GVGC + AG +L+R SS   R  PFASL +S SS                                    
Subjt:  MAWCATRSFHMPAFDV-TALRS-KTPL-AVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSS------------------------------------

Query:  ----RKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL
             KFVS++VEDQTEQVLKNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFP+P+PARSTYQVAALPL+AK+EIECIATL
Subjt:  ----RKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTGTGCGACTCGGTCCTTTCACATGCCGGCGTTCGACGTCACTGCACTACGCTCCAAGACTCCCTTGGCCGTCGGCGTTGGTTGTGTATCGGTGGCCGGAAC
CACCTTGTGGCGGTCTTCCTCAACTTCCAAGCGTCAAATTCCCTTCGCCTCCCTCGGCATTTCCACCAGTTCTAGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGG
AGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTTAAGACGACTATTATGTTGGCTGATCTGAAGGATTTCAAGAAAGTT
AACGAGATATATGGTAAATATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATCGAATGCATCGCTACACT
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGTGTGCGACTCGGTCCTTTCACATGCCGGCGTTCGACGTCACTGCACTACGCTCCAAGACTCCCTTGGCCGTCGGCGTTGGTTGTGTATCGGTGGCCGGAAC
CACCTTGTGGCGGTCTTCCTCAACTTCCAAGCGTCAAATTCCCTTCGCCTCCCTCGGCATTTCCACCAGTTCTAGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGG
AGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTTAAGACGACTATTATGTTGGCTGATCTGAAGGATTTCAAGAAAGTT
AACGAGATATATGGTAAATATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATCGAATGCATCGCTACACT
TTAA
Protein sequenceShow/hide protein sequence
MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTSSRKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKV
NEIYGKYFPSPAPARSTYQVAALPLDAKVEIECIATL