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IVF0021094 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021094
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:26487338..26487547
RNA-Seq ExpressionIVF0021094
SyntenyIVF0021094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032830.1 uncharacterized protein E6C27_scaffold708G00950 [Cucumis melo var. makuwa]2.15e-0643.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M++KEG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

KAA0040659.1 uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]2.21e-0642.47Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M+++EG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S + EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

KAE8637433.1 hypothetical protein CSA_004611, partial [Cucumis sativus]4.56e-0746.58Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGRTAR-------------------QHLTKLEEGLEEMQAEVNKMSGLMEELV
        MAS+EGY+SPVEQVVEGPTTRGR A+                   +    LE  LEE+Q ++ + S LMEEL+
Subjt:  MASKEGYKSPVEQVVEGPTTRGRTAR-------------------QHLTKLEEGLEEMQAEVNKMSGLMEELV

TYK18079.1 uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]3.01e-0643.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M+++EG+ SPVEQV+EGP TRGR               T R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

TYK30387.1 uncharacterized protein E5676_scaffold575G00690 [Cucumis melo var. makuwa]2.01e-0643.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M++KEG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

TrEMBL top hitse value%identityAlignment
A0A5A7SPK5 Uncharacterized protein3.1e-0443.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M++KEG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

A0A5A7TFP3 Retrotrans_gag domain-containing protein4.1e-0443.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M+++EG+ SPVEQV+EGP TRGR               T R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

A0A5A7THC0 Reverse transcriptase domain-containing protein3.1e-0442.47Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M+++EG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S + EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

A0A5D3D3V4 Retrotrans_gag domain-containing protein4.1e-0443.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M+++EG+ SPVEQV+EGP TRGR               T R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

A0A5D3E2T1 Uncharacterized protein3.1e-0443.84Show/hide
Query:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV
        M++KEG+ SPVEQV+EGP TRGR                 R+H    LT LE+G+E++Q  V ++S   EELV
Subjt:  MASKEGYKSPVEQVVEGPTTRGR---------------TARQH----LTKLEEGLEEMQAEVNKMSGLMEELV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTAAGGAAGGATACAAGTCACCGGTTGAGCAAGTCGTTGAAGGGCCAACGACAAGAGGACGCACTGCACGACAGCATCTTACTAAGTTGGAGGAGGGATTGGA
GGAGATGCAGGCCGAAGTCAACAAGATGAGCGGGTTGATGGAAGAGTTAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTAAGGAAGGATACAAGTCACCGGTTGAGCAAGTCGTTGAAGGGCCAACGACAAGAGGACGCACTGCACGACAGCATCTTACTAAGTTGGAGGAGGGATTGGA
GGAGATGCAGGCCGAAGTCAACAAGATGAGCGGGTTGATGGAAGAGTTAGTCTAA
Protein sequenceShow/hide protein sequence
MASKEGYKSPVEQVVEGPTTRGRTARQHLTKLEEGLEEMQAEVNKMSGLMEELV