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IVF0021122 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021122
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr02:2306516..2307462
RNA-Seq ExpressionIVF0021122
SyntenyIVF0021122
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144121.1 RING-H2 finger protein ATL39 [Cucumis sativus]2.45e-8591.33Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRRRMA SYEEMMNSSRSFQSSLSSFKFKKVA A A  EEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF

Query:  HASCIDMWLYSHSDCPLCRAPVAVP--GVSRHETTTAEQDENSGHVLLEV
        HASCIDMWLYSHSDCPLCRAPVAV   G SRHE T AEQ+ENSGHVLLEV
Subjt:  HASCIDMWLYSHSDCPLCRAPVAVP--GVSRHETTTAEQDENSGHVLLEV

XP_008450904.1 PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]5.49e-100100Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF

Query:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
        HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Subjt:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV

XP_022147740.1 E3 ubiquitin-protein ligase EL5-like [Momordica charantia]3.40e-6677.56Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSRSFQSS----LSSFKFKK-VAAATATAEE-GNGNECAVCLSAFEDGEEVKK
        MLYYGLVVVGTAAIVLV+YNFIVI+WCSD R R    MA SY EMM+SS SFQSS    LSSF+FKK   AA ATAEE GNG ECAVCLSAFEDGEEVKK
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSRSFQSS----LSSFKFKK-VAAATATAEE-GNGNECAVCLSAFEDGEEVKK

Query:  LPRCTHTFHASCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE
        LPRCTH FHA CIDMWLYSHSDCPLCRAPVA+ PG+ +H T  AEQ ENSGH LLE
Subjt:  LPRCTHTFHASCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE

XP_022987479.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]2.99e-6673.38Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR---MAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKL
        MLYYGLVV+GTAAIVLVLYNFIVI WCSD+R  R    +A SY EM+NSSRS QSS    L SFKFKK +AA A  EEGNGNEC VCLSAFE+GEEVKKL
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR---MAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKL

Query:  PRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE
        PRC H FHA CIDMWL+SH DCPLCRAPVAVPG+S+ +T  AEQ  NSGH L E
Subjt:  PRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE

XP_038879803.1 RING-H2 finger protein ATL39-like [Benincasa hispida]3.96e-7378.95Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR---MAVSYEEMMNSSRSFQSSLSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKKLPR
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRR    +A SY EMMNSSRSF SSL SFKFKK    AA A  EEG GNECAVCLSAFEDG+EVKKLPR
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR---MAVSYEEMMNSSRSFQSSLSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKKLPR

Query:  CTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE
        CTH FHASCIDMWL+SHSDCPLCRAPV   G+S+H+   AEQ+ENSGH LLE
Subjt:  CTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE

TrEMBL top hitse value%identityAlignment
A0A0A0LWX2 RING-type E3 ubiquitin transferase4.6e-6691.33Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRRRMA SYEEMMNSSRSFQSSLSSFKFKKVA   A AEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF

Query:  HASCIDMWLYSHSDCPLCRAP--VAVPGVSRHETTTAEQDENSGHVLLEV
        HASCIDMWLYSHSDCPLCRAP  VAV G SRHE  TAEQ+ENSGHVLLEV
Subjt:  HASCIDMWLYSHSDCPLCRAP--VAVPGVSRHETTTAEQDENSGHVLLEV

A0A1S3BQC4 RING-type E3 ubiquitin transferase3.4e-77100Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF

Query:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
        HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Subjt:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV

A0A5A7UKT6 RING-type E3 ubiquitin transferase3.4e-77100Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
        MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTF

Query:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
        HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Subjt:  HASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV

A0A6J1D0Z7 RING-type E3 ubiquitin transferase1.1e-5176.28Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSRSFQSS----LSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKK
        MLYYGLVVVGTAAIVLV+YNFIVI+WCSD R R    MA SY EMM+SS SFQSS    LSSF+FKK   AAA    EEGNG ECAVCLSAFEDGEEVKK
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSRSFQSS----LSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKK

Query:  LPRCTHTFHASCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE
        LPRCTH FHA CIDMWLYSHSDCPLCRAPVA+ PG+ +H  T AEQ ENSGH LLE
Subjt:  LPRCTHTFHASCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE

A0A6J1JJ05 RING-type E3 ubiquitin transferase1.1e-5173.38Show/hide
Query:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---RMAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKL
        MLYYGLVV+GTAAIVLVLYNFIVI WCSD+R  R    +A SY EM+NSSRS QSS    L SFKFKK +AA A  EEGNGNEC VCLSAFE+GEEVKKL
Subjt:  MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---RMAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKL

Query:  PRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE
        PRC H FHA CIDMWL+SH DCPLCRAPVAVPG+S+ + T AEQ  NSGH L E
Subjt:  PRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.0e-1446.84Show/hide
Query:  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSR--HETTTAEQDENSGH
        A AEEG+  ECA+CL+ F DGEE++ LP C H+FH  CID WL S S CP CR  +      R  H +T   +D+   H
Subjt:  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSR--HETTTAEQDENSGH

P0C041 Putative RING-H2 finger protein ATL536.1e-1552.54Show/hide
Query:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE
        NG +C++CL  F + E ++ LP+C HTFH  CID WL SHS+CPLCRA + VP   + E
Subjt:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE

Q9LF64 RING-H2 finger protein ATL524.7e-1532.08Show/hide
Query:  LYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEE
        L   L+ + T+A++LV Y  ++ K+C   RH +  +     + ++   F SS          L+    K +      + +G  +G++C+VCLS FE+ E 
Subjt:  LYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEE

Query:  VKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH
        ++ LP+C H FH  CID WL SHS+CPLCRA V         V ++ +       NS H
Subjt:  VKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH

Q9LRB7 E3 ubiquitin-protein ligase EL51.5e-1653.85Show/hide
Query:  RSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVP
        RS   ++ S      AA     E+ +G ECAVCL+  EDGEE + LPRC H FHA C+DMWL SHS CPLCR  V VP
Subjt:  RSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVP

Q9LX93 E3 ubiquitin-protein ligase RING12.1e-1547.83Show/hide
Query:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENS
        +G EC+VCL+ FE+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV +     H+ T      +S
Subjt:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENS

Arabidopsis top hitse value%identityAlignment
AT2G17450.1 RING-H2 finger A3A7.4e-1646.84Show/hide
Query:  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSR--HETTTAEQDENSGH
        A AEEG+  ECA+CL+ F DGEE++ LP C H+FH  CID WL S S CP CR  +      R  H +T   +D+   H
Subjt:  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSR--HETTTAEQDENSGH

AT3G16720.1 TOXICOS EN LEVADURA 28.2e-1553.97Show/hide
Query:  ECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQD
        ECAVCLS FE+ E  + LP C HTFH  CIDMW +SHS CPLCR+   V  ++  E+T A ++
Subjt:  ECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQD

AT4G17905.1 RING/U-box superfamily protein4.3e-1652.54Show/hide
Query:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE
        NG +C++CL  F + E ++ LP+C HTFH  CID WL SHS+CPLCRA + VP   + E
Subjt:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE

AT5G10380.1 RING/U-box superfamily protein1.5e-1647.83Show/hide
Query:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENS
        +G EC+VCL+ FE+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV +     H+ T      +S
Subjt:  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENS

AT5G17600.1 RING/U-box superfamily protein3.3e-1632.08Show/hide
Query:  LYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEE
        L   L+ + T+A++LV Y  ++ K+C   RH +  +     + ++   F SS          L+    K +      + +G  +G++C+VCLS FE+ E 
Subjt:  LYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEE

Query:  VKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH
        ++ LP+C H FH  CID WL SHS+CPLCRA V         V ++ +       NS H
Subjt:  VKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTATTATGGCCTTGTCGTTGTCGGAACGGCCGCGATTGTCTTAGTTCTCTACAATTTCATCGTTATCAAGTGGTGCTCTGACAGCCGCCACCGCCGGCGGATGGC
TGTAAGTTATGAGGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCCTTGAGCAGTTTCAAGTTCAAGAAGGTGGCGGCGGCGACGGCGACAGCGGAAGAAGGGAATG
GGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGTGAAGAGGTTAAGAAATTGCCGAGATGTACGCATACGTTTCATGCTTCTTGTATAGATATGTGGCTTTAT
TCTCACTCCGATTGCCCGCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGGTGAGCCGACACGAAACCACCACGGCGGAGCAAGACGAGAATTCAGGTCATGTGTTGTTGGA
GGTTTGA
mRNA sequenceShow/hide mRNA sequence
GTCCTGATTGTACTCTGTTTTGTCTTCATTCTTTGAAAGCTCTACAGTTTATCTACTTCAATGAATTAAACATAAAATTCTTCCATCTTTGACTCTAAAAACATCATCTT
ATTATCAATTTCAATCAATTATGATAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAAAAATACCCACAAAATCCTCTGTTTCTTCTCCAATTTCAGAATCCAAAAT
GAGTGATTCTTCTACTTCTACCCCTCATCCTGCAAATCAGCTTACCCATGTTGTATTATGGCCTTGTCGTTGTCGGAACGGCCGCGATTGTCTTAGTTCTCTACAATTTC
ATCGTTATCAAGTGGTGCTCTGACAGCCGCCACCGCCGGCGGATGGCTGTAAGTTATGAGGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCCTTGAGCAGTTTCAA
GTTCAAGAAGGTGGCGGCGGCGACGGCGACAGCGGAAGAAGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGTGAAGAGGTTAAGAAATTGCCGA
GATGTACGCATACGTTTCATGCTTCTTGTATAGATATGTGGCTTTATTCTCACTCCGATTGCCCGCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGGTGAGCCGACACGAA
ACCACCACGGCGGAGCAAGACGAGAATTCAGGTCATGTGTTGTTGGAGGTTTGAAACCGAAGATGTTGATAATAATTTTGAAATAGGTGGTTGGATTTGGAAAATTCTGA
TTCTTTTGTTTTGTGATGATGATGTTTGTTGGGTGGTTCAATTCAAAGGATGAGGATAATGAAGAATTTGTGAAAAAGTTGGAAGGTGTTTTAAATGGGGTATAGTTATT
AAGTAGACCCCATTTCGAATATTTGAGAAAGAGTACACCCCAATCACAATTTGTGGTAACTATGTTC
Protein sequenceShow/hide protein sequence
MLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLY
SHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV