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IVF0021123 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021123
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:6113471..6113998
RNA-Seq ExpressionIVF0021123
SyntenyIVF0021123
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]4.37e-10888.7Show/hide
Query:  FPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTF
        FPISNEQE+NTMFSIAL FPNMVHLYVTVSM+D  INLNVEP+YV    DV+PESDAPPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSNTF
Subjt:  FPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTF

Query:  TDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NK+++QHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]2.42e-10489.39Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSIALSFPNMVHLYVTVSM+D  INLNVEP+YV    DV+PESDAP VCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TFTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NKK+LQHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.02e-9986.03Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSI L F NMVHLYVTVSM+D  INLNVEP+YV    DV+PES+APPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
         FTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NK++LQHM+KCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

KAA0050312.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.05e-107100Show/hide
Query:  MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN
        MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN
Subjt:  MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN

Query:  TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
Subjt:  TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.35e-10089.39Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSIAL FPNMVHLYVTVSM+D  INLNVEP+YV    DV+PESDAPPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYV----DVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TFTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NKK+LQHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein3.1e-8588.7Show/hide
Query:  FPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTF
        FPISNEQE+NTMFSIAL FPNMVHLYVTVSM+D  INLNVEP+    YVDV+PESDAPPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSNTF
Subjt:  FPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTF

Query:  TDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NK+++QHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

A0A5A7T1X8 SWIM-type domain-containing protein1.1e-8589.39Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSIALSFPNMVHLYVTVSM+D  INLNVEP+    YVDV+PESDAP VCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TFTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NKK+LQHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.8e-8689.39Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSIAL FPNMVHLYVTVSM+D  INLNVEP+    YVDV+PESDAPPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TFTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NKK+LQHMVKCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

A0A5D3BZN0 Serine/threonine-protein phosphatase 7 long form-like protein2.4e-82100Show/hide
Query:  MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN
        MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN
Subjt:  MVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQEHDPIIVPMVTDN

Query:  TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
        TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
Subjt:  TELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein4.9e-8386.03Show/hide
Query:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN
        M FPISNEQE+NTMFSI L F NMVHLYVTVSM+D  INLNVEP+    YVDV+PES+APPVCHEEEMVATNEY EFRTETDDEFEEMDFDGCEYEVPSN
Subjt:  MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPK----YVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSN

Query:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK
         FTDLDMNAVD IQEHDPIIVPMVTDNT+LYTGMIC+NK++LQHM+KCFAIKSHAPYEVVESTPTKWVIRCK SN+GCK
Subjt:  TFTDLDMNAVDDIQEHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCCCTATTTCAAACGAACAAGAAATAAACACTATGTTTTCAATTGCACTGTCGTTTCCAAACATGGTGCATCTATATGTGACTGTGAGTATGATAGATTTGGT
CATAAACTTAAATGTAGAACCAAAATATGTTGATGTTGACCCGGAGTCAGATGCACCACCAGTGTGCCATGAAGAAGAAATGGTAGCTACCAACGAATACATAGAGTTTA
GAACAGAAACTGATGACGAATTTGAAGAGATGGATTTCGATGGTTGTGAATATGAAGTTCCATCCAATACATTCACTGATTTAGACATGAATGCAGTAGATGACATTCAA
GAACACGATCCAATTATAGTTCCGATGGTGACCGACAACACCGAATTGTACACGGGAATGATTTGTGACAATAAAAAAATATTGCAACATATGGTTAAGTGCTTTGCTAT
TAAGAGTCACGCACCATATGAAGTAGTAGAGTCTACACCGACAAAGTGGGTCATCCGATGTAAGAACTCGAACAAAGGTTGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCCCTATTTCAAACGAACAAGAAATAAACACTATGTTTTCAATTGCACTGTCGTTTCCAAACATGGTGCATCTATATGTGACTGTGAGTATGATAGATTTGGT
CATAAACTTAAATGTAGAACCAAAATATGTTGATGTTGACCCGGAGTCAGATGCACCACCAGTGTGCCATGAAGAAGAAATGGTAGCTACCAACGAATACATAGAGTTTA
GAACAGAAACTGATGACGAATTTGAAGAGATGGATTTCGATGGTTGTGAATATGAAGTTCCATCCAATACATTCACTGATTTAGACATGAATGCAGTAGATGACATTCAA
GAACACGATCCAATTATAGTTCCGATGGTGACCGACAACACCGAATTGTACACGGGAATGATTTGTGACAATAAAAAAATATTGCAACATATGGTTAAGTGCTTTGCTAT
TAAGAGTCACGCACCATATGAAGTAGTAGAGTCTACACCGACAAAGTGGGTCATCCGATGTAAGAACTCGAACAAAGGTTGCAAATGA
Protein sequenceShow/hide protein sequence
MSFPISNEQEINTMFSIALSFPNMVHLYVTVSMIDLVINLNVEPKYVDVDPESDAPPVCHEEEMVATNEYIEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDDIQ
EHDPIIVPMVTDNTELYTGMICDNKKILQHMVKCFAIKSHAPYEVVESTPTKWVIRCKNSNKGCK